| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3047 |
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| Symbol | |
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| ID | 6779903 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 3515509 |
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| End bp | 3516903 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642769041 |
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| Product | type VI secretion protein, VC_A0114 family |
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| Protein accession | YP_002139845 |
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| Protein GI | 197119418 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3522] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03353] type VI secretion protein, VC_A0114 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCCAA TCGAGAGGCC CGTATTCTGG CACCAGGGGC TGTTTCTGCG GCCCCAGCAT
TTCCAGTTGT CAGAGCGCTC GTTGCAGTCG CAACTGGCTC CGTACCAGTT GTGCCTCATG
CCGGACTTTT GGGGCGTGCA ACGGATGGAG ATCAGGTGCA CGGCCGGCGG GATACCTAGC
CTCGAAATCT CCGGCGCCTT CCTTTTTCCC GACGGCACCT ATGCCGTCGT CCCAGATAAC
GCGCGGGTCG AGTCCAGGCC GGTCCTGGAA GTGGCACTGG CGGGAAGGGA TTCCTGCACC
GTCTACCTTG GCCTGAAAAA GTGGAGCCCC GCCGGCCATA ACGTCGCCAC CTTGCTCCCT
GGCGACCCCC TCTCCAAGGT CGCTACGCGG TTCGTTGCCG ACTCAGACGC CCCGCCCCGT
GCCGATCTCC ACGCAGGGGG GGCTCAGGCG GAGGTGCGGC AGATGGCCTT GGCCCTGCAG
CTTTTCTGGG AGAGCGAGTT GGAGTCGTTG GGGGATTACC TGCTCATCCC TGTCGCCCGG
CTCGCGCTGC GCGGCGAAAC TGCCGTGCCT TCCCGTGACT TTATCCCCCC CTGCATCACC
CTGGCGGGCT CACCCGCGCT CCTCGACCTG CTCCAGGAAA TCCGGGAACA GCTGGCCTCA
CGCTGCCGCT GGCTGGAGGG ATACAAGAAG GAACGCGGCA TTCAGGCGGC CGAGTTCGGT
TCCAAGGATC TGGTCTTCCT CCTAGCCCTC AGAACCGTGA GCCGGCACCT CGCCAGGCTT
AGCCACTGGA TCGAGGCGGT TGAGGTTCAC CCTTGGCAGG TTTACGGGCT TTTGGGGGAG
CTCGCCGCGG AACTCACCTG CTTCTCGGAG AGCATCGGTG CCTTCGGTGA GTCCGTAGCC
GACGGGGGAA GGCTCATGCC GCAGTACCGG CACCAAGAGC TGGCGTGGAG CTTTCGGCTG
GCCCGTGATC TCATCGTCCA GTTGCTGAAC GAGGTGACCG CGGGGCCGGA ATACGCCCTG
ACCCTCGCCT TCGACGGGAC CTGGTTCGCC TCCGATCTCA AGCCCGCGCA CTTCCAGGGT
CACAGCAGGT TTTACCTGGT GCTGAATACG AACGAGGATC CGAAACTCGT CCTGGCTTCG
GTCGCGACCG CAGCGAAATT GACCGCACGC GAACGGCTGC CGCTGCTGAT CTCCCAGGCG
CTCCCGGGGA TCGCCCTGGA GTATATTCCC GATCCCCCCC GCGAACTGCC GCACCGCTCG
ACCTCCCTCT TTTTCAGCAT AGACAGCCGC TGCGATCAGT GGAAGCTGGT GCAGAAGTGG
AACAACATCG CCCTCAGCTG GGACCAGGCC CCAGCTGACC TAGAAGTGCA GGTCATGATC
GTTGCCAGGT CCTAG
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| Protein sequence | MMPIERPVFW HQGLFLRPQH FQLSERSLQS QLAPYQLCLM PDFWGVQRME IRCTAGGIPS
LEISGAFLFP DGTYAVVPDN ARVESRPVLE VALAGRDSCT VYLGLKKWSP AGHNVATLLP
GDPLSKVATR FVADSDAPPR ADLHAGGAQA EVRQMALALQ LFWESELESL GDYLLIPVAR
LALRGETAVP SRDFIPPCIT LAGSPALLDL LQEIREQLAS RCRWLEGYKK ERGIQAAEFG
SKDLVFLLAL RTVSRHLARL SHWIEAVEVH PWQVYGLLGE LAAELTCFSE SIGAFGESVA
DGGRLMPQYR HQELAWSFRL ARDLIVQLLN EVTAGPEYAL TLAFDGTWFA SDLKPAHFQG
HSRFYLVLNT NEDPKLVLAS VATAAKLTAR ERLPLLISQA LPGIALEYIP DPPRELPHRS
TSLFFSIDSR CDQWKLVQKW NNIALSWDQA PADLEVQVMI VARS
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