Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_3028 |
Symbol | |
ID | 6779884 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 3494090 |
End bp | 3496354 |
Gene Length | 2265 bp |
Protein Length | 754 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642769022 |
Product | RNA binding S1 domain protein |
Protein accession | YP_002139826 |
Protein GI | 197119399 |
COG category | [K] Transcription |
COG ID | [COG2183] Transcriptional accessory protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACGCAA CAGACACACC TCAATTGCTT GAAATCATAG TCGAAGAAAG CGGGCTGCCG CGCGGCGGCG TGCTCCAGAC GGTGGCACTT TTGAACGAGG GGGGAACGGT TCCCTTCATC GCGCGATACC GGAAGGAGCA GACCGGAGAA CTGGACGAGG TCCAGATCCG CCAGATCGAG GACCTGCTGA TCTATCACCG CGAGCTGTCC GAGCGCAAGG TGACGGTGCT GAAAAGTATC GAGGAGCAGG GAAAGCTCAC CCCGGAGCTT TCGGCTCGCA TCGCGAGCTG CCGCAAGAAG ACCGACCTGG AAGACCTGTA CCTCCCCTAC AAGCCGAAGC GCCGCACCAA GGCCACCATC GCGCGGGAGA AGAGGCTGGA GCCCCTGGCA GAACTGATCG CGGCGCAGGA GTTGACCACG GGAAGCCCGG CTGAGGCGGC GGCTCCTTTT ATCAACGCCG AGTTGGGCGT ACCCGACGCA GAGGCCGCCC TGGAAGGGGC TGCACACATC ATCGCCGAGC AGTTGAGCGA GAACGCGGAC TTGCGCGGCA TGGTGCGCGA CCTTACCAGG GAGCAGGGGA TATTCGGCTC GCTGCTGATC GGCGAAGGGG CCGACAAAGA CGGCAAGTTC CGGATGTACT ACGACTACCA GGAGCCGCTG AAGTCGATAC CGTCCCACCG CATGCTCGCC ATGCGGCGCG GCGAAAAGGA AGACGTCTTA AGGCTCGCCC TGCTGGCGCC GGAAGAGGAG ATCGTCGGGA GGCTGAAGGG GGCGTTGGTC AAACGGGAGA GCATCTTCAA GGGGATCCTG GAAGCGGCGG CAGCCGACGC CTACAAGCGG CTCATCGCCC CCTCGATCGA GGTGGAACTG CGGCTTGAGG CAAAGACCCG CGCAGACGAG GCGGCCATCG CCGTTTTCGC GCAGAACCTG AAGAACCTTT TGCTCCTGCC GCCGGCCGGA GGGAGGCGGG TGCTGGGGAT CGACCCGGGC CTTAGAACCG GCTGCAAGCT CGCCGCGATC AGCGAGACCG GGCGCTTTCT GGAGCATGTC ACCATCTACC CGCACACAGG CGGAGCCAAG GCGGAGGCGG CCGGCGCCGA ACTGGCGGGG ATGGTGCAGC GCAACGACTG CCTTCTCATT GCCATAGGCA ACGGCACCGG GGGGCGCGAG ACCGAGATCT TCGTGCGCGA CGCATTGAGG AAGGCGGGGA TAAAGGCGGA GACGGTGATG GTGAACGAGG CGGGCGCCAG CATCTACTCC GCCTCGGAGA TCGCCAGGGA GGAGTTCCCC GAACTCGACC TGACCGTCCG CGGCGCCATA TCCATCGGCC GCAGGCTACA GGACCCGCTC GCCGAACTGG TGAAGATCGA CCCCAAGAGC ATCGGGGTGG GCCAGTACCA GCACGACGTG AACCAGACCC TGCTGAAAAA GGCGCTGGAC GCGGTGGTGG AATCCTGCGT CAACTTCGTC GGCGTCGACT TGAACAGCGC CTCGTGGGCC CTGCTCTCCT ACGTCGCCGG CCTCTCGGAA AGGCAGGGGC GGGCCATCGT CAGGCACAGG GACGAGCAAG GAGCCTTCGC GTCGCGGCAG TCGCTCCTAA AGGTCGCGCG CTTCGGTCCG AAGGCGTTCG AGCAGGCGGC GGGCTTTTTA CGGATCCGGG GTGGGGAGAA CCCGCTGGAC AATACTGCGG TACACCCGGA GAACTACGCG GTGGTCGAGA AGATGGCGGC TGACCTCGGG GTGAGCCTGT CGCAACTGGT GGCGGACCCG GGTCTTTCGG CCGGAATCAG GATCGAGCGC TACGTGACCG ACACCATCGG CATTCCGACG CTGCGCGATA TCCTGGCGGA GCTTAAGAAA CCGGGGCGCG ACCCGCGCGA GCAGTTCCAG AGCGCGAGCT TCAGAGAGGA CGTGGTGACC ATCGCCGACC TGAAGGAGGG GATGATCCTG CAGGGGGTGG TGACCAACGT CGCCGCCTTC GGCGCCTTCG TGGACATCGG GGTACACCAG GACGGGCTGG TACACGTAAG CCAGCTCTCG CACCGCTTTA CCAAGGACCC CAACGATGCA GTCAAGGTCG GGGAGATCGT GAAGGTAAAG CTGCTTTCGG CTGATCCGGA GAGAAAGAGG ATCTCGCTCT CGATCAAGCA GGCGGAGCCC GAGAAGGCGC CGAAGAGCGC CGAAGTCAGG AAGCCGCAGC CCAAAGAAAA GCCGGTGAAC GAGCAGTCGG CGTGGGAAAA GGCGGGGTTC AGGGTGAAGA AATAA
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Protein sequence | MHATDTPQLL EIIVEESGLP RGGVLQTVAL LNEGGTVPFI ARYRKEQTGE LDEVQIRQIE DLLIYHRELS ERKVTVLKSI EEQGKLTPEL SARIASCRKK TDLEDLYLPY KPKRRTKATI AREKRLEPLA ELIAAQELTT GSPAEAAAPF INAELGVPDA EAALEGAAHI IAEQLSENAD LRGMVRDLTR EQGIFGSLLI GEGADKDGKF RMYYDYQEPL KSIPSHRMLA MRRGEKEDVL RLALLAPEEE IVGRLKGALV KRESIFKGIL EAAAADAYKR LIAPSIEVEL RLEAKTRADE AAIAVFAQNL KNLLLLPPAG GRRVLGIDPG LRTGCKLAAI SETGRFLEHV TIYPHTGGAK AEAAGAELAG MVQRNDCLLI AIGNGTGGRE TEIFVRDALR KAGIKAETVM VNEAGASIYS ASEIAREEFP ELDLTVRGAI SIGRRLQDPL AELVKIDPKS IGVGQYQHDV NQTLLKKALD AVVESCVNFV GVDLNSASWA LLSYVAGLSE RQGRAIVRHR DEQGAFASRQ SLLKVARFGP KAFEQAAGFL RIRGGENPLD NTAVHPENYA VVEKMAADLG VSLSQLVADP GLSAGIRIER YVTDTIGIPT LRDILAELKK PGRDPREQFQ SASFREDVVT IADLKEGMIL QGVVTNVAAF GAFVDIGVHQ DGLVHVSQLS HRFTKDPNDA VKVGEIVKVK LLSADPERKR ISLSIKQAEP EKAPKSAEVR KPQPKEKPVN EQSAWEKAGF RVKK
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