| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2959 |
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| Symbol | |
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| ID | 6779813 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 3426669 |
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| End bp | 3427586 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642768954 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_002139758 |
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| Protein GI | 197119331 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGAATA TAAAAGATAT GGTTATTCTC GTCACTGGCG CCACCGACGG TCTGGGGGAA
AAGGTTGCCG CCGATCTGGC AGGGACGGGG GCAACTTTGT TGCTGCACGG CAGGGACCGG
GACAAAGGAC GGATGGTGCA GGCGAAGATC CACAAGGCGA CCGGCAACGA CCGTCTCTAT
TATTACAATG CAGACCTCTC GTCGCTGGAC GGGGTCGATT CCCTCGCCGC TTTGGTAACC
AAGAGGTGTT CCCGGTTGGA TGTGCTGATA AATAACGCCG GCGTCGGCGC CGGGCCCGAC
CCGACGCGCC GTCAGGCAAG CCCCGACGGG TTCGAACTGC GGTTCGCCGT CAACTACCTT
GCGCCCTTCC TGCTCACCCG CAGGCTCCTG CCGCTGCTAC GGCGCACGGC GAAGGAGGCG
GGAGAGGCGC GTATCGTCAA CGTCGCTTCG GTGGCGCAGC GGGACATCGA TTTCGAGGAC
GTGATGCTGG AAAAGGAGTA TGACGGCATG CGCGCCTACG CCCAGAGCAA ACAGGCCTTG
ATCATGTTCA CCCTGGATCT GGCTGAAGAA CTGGCTGGGA CGGGGGTAAC GGCGAACGTG
CTCCACCCGG CCTCGCTCAT GGACACCAAC ATGGTGCGGG AGTGGTTCGG AGCGGCGCGT
ACTACGGTGG AGGAGGGGGC GGCTCACGTG GAGCGCCTGG TGCTCTCCGA GGATTTGAAG
GGGGTAAGCG GTATCTATTT CGATCAGAGC CGGGAATCGC GCGTCGCGGA GCAGGCCAAT
GACGTGGAAG CCCGCAGGCG CCTGCGCGAA TTGAGCTTCA AATGGACCGG AGCCGGCAGC
CAAAACTCTT CGCGGTTTTC TTCCTGGTCC AGCACCAGTT CCCAGACATC CTCATCCAGG
TCGTGCCAAG GCGTATGA
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| Protein sequence | MRNIKDMVIL VTGATDGLGE KVAADLAGTG ATLLLHGRDR DKGRMVQAKI HKATGNDRLY
YYNADLSSLD GVDSLAALVT KRCSRLDVLI NNAGVGAGPD PTRRQASPDG FELRFAVNYL
APFLLTRRLL PLLRRTAKEA GEARIVNVAS VAQRDIDFED VMLEKEYDGM RAYAQSKQAL
IMFTLDLAEE LAGTGVTANV LHPASLMDTN MVREWFGAAR TTVEEGAAHV ERLVLSEDLK
GVSGIYFDQS RESRVAEQAN DVEARRRLRE LSFKWTGAGS QNSSRFSSWS STSSQTSSSR
SCQGV
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