| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2884 |
|---|
| Symbol | |
|---|
| ID | 6779736 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | + |
|---|
| Start bp | 3321081 |
|---|
| End bp | 3324134 |
|---|
| Gene Length | 3054 bp |
|---|
| Protein Length | 1017 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 642768877 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002139683 |
|---|
| Protein GI | 197119256 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACAAGA CCTCTTACTT CTTTACCGCC AACTGCGGCG CCTGCCACCC CGGTGGCGCG
GCTACGCAAT ATGACCGCAA TGGTAACCTC TACTTCAATA GAACCACCAA CCTCTTCGGT
TATCTCGGCG GCGTCGCGGC ACTGACGGAT CCGGCCGCCA AGCTGGATGG CGACTACGGA
TTCATCAACC CCAGCACCGG AGTGCCAGGA ACGGCAGCAT GGAGCAAGAC CGGCATCATG
GAACCGGACT GCCTCATGTG CCACATGAAC AAGTACGACA CGACCACAAA GACAGTCGTC
GATGCCACGA AAAACTATGT GGTATTCAAC AACAACGACA TGGGCGCAAG CTGGCACAAG
CGTGCCGCCA CAGCCCGCGG TATCTCGGTT GCGGGCGTTG CCAACTTCGA TTCGGCCGCG
ACTCTTGGCG CCGGATGGGG GCAGGTAACC TACGCCACCA CCGTTGCTGA CGGCACACCA
CCGATGGCAA CGGCAATTAC CATCAACTAC GGCCTCGGCA CCACCGCCGG CACCCTTGTT
GCCGACAGCG GCAATAATTA TGTGATTCCG ACAGGCGTCA TCGGCGCTGC CGGGAACGCC
AACTGCCGCG GCTGCCACAC CTCTCCCGAC GGCAAGAAGT CGGGGCGCAC CACCCTTGCC
ACCACCGACG TCCACTCGGC CCTGGCCTGC ACCCGCTGTC ACGCAACCCC CAATACGGGG
ACAAAGGACT CCCTCGGTGT CGCGACGGGG AACACCCACC AGGTTGGCAA GGGGAACATC
ACCATCGGCA CCATCCGCAA CGACCTGGAT AATACGGTGA AAAGCTGTGA AAACTGCCAC
CTCGATGGTG GTGACGCCGC AGCGCCGAAC CCGTCCGCGG CACACCTCAA CAAGGTTCCA
GGTTCCCACA TGAACTTCCT GAACTGTCAG GTATGCCATA TCCGCTTCGT CAGTGCCGGC
AGCACGACTG CACCGACGAT TCCGGAGCAG GTGATCGAGA TGGCTTCCAA CGGCACCCAG
AACATCTCGA AACTGAACGC ATACCTCGGA ACCGACCCCC TCGACCCCAC AAAGAACCTC
GTCGATCTGA CCGGCCAGCC CTTTCGCTGG TACCCCGGCC TCAAGTGGTG GGGTAACAAG
ATCACCACCG TCAAGCCCCT CTACACCGCA TGGTTCGGGG AATGGATCAG CGGAGAGGGT
AGTGCAGCGG TGATCAGGCC GATTAATCTT CGGCTTGTTC GCAAGGGAAT GACGGACCAG
TACGCCCAGA ATGTGGCCCG ACTCGCGTCG CTGCCGCTGA CTGCGGGGAC GCAGGTTGCC
AACGGGGCCC CTATCCTGCA TAGGAAGGAG GAGATAAAGG CGGCTCTTGT GAGAATGAGC
ACTGTCACTG ACACTGCCGG CACCTCCAAC GACAAAATCG CCACCAGACC CGTCCTGGTC
CGCGCCGACA AAGTCTATTT CCTGAACGCC GCAGGCGAAG TCGAGTATTT CGAGAGCACC
GTTGCAGAAA GCCATGACTT CGCAGTGAAT CACAACGTCG TTGCGAAGCG CGACGCGGCT
AACCCAGTCG TCAAACCTGG TCCGTACGGT TCCGGCGGTT GTACGGACTG CCACGGGAAC
AGCTCTCCAT TCTTCCATGG AATGCAGCTC GCGGAGCCGG CCCAGTACGA TTATCTGGAC
GAAGCAGGCA CCGTTGCCAA TACGAATGCC GGCAAGCCGA TCTATAAGCC GCACTACAAG
ACCATGGGCT ATACGGAGTT CAGGGCCAAG CAGCTGACAG CAGACATCGT CCCGGCGATC
ACCCGGGTTA TTGGGCAAGG GAGCGTGGCG GTCAGCGAGG GAGCCAACAG CTGCACCACC
GCCGGCGGCA ATGAATGCGC CATCGGTGCT ACACCCGCCT CCGATGTTAC CTTTACCGCG
ACTTCGGCAC CTGGACAGGC GTTTGTGAAA TGGTCAGGGT GTACACCGTC ACAATCGGAT
CCCCTTTCCT GCACGGCCAA TGTCGGCACA CCGGCATCTG GCGCAGAAAA CCGCGGCATC
CTGGTAACGG CGACATTCAC TGAGCCAGCA GCCCCCGCGC CGCCGCCGGC AGTCACAACT
TTTACCCTTT CCGCTTCATC GGTCACTGTC GGCGGCACAA AGGGCGGCAC ACTTGGAGCA
ACATCAATTG ACGTTGCATC AGGAAGTGAC TATTTCATCA GTGTCCGCCC TGAAGCCGGC
TACACAGTAA CGGCTGCCAC CGTTGACGGT GCGGATGTAC TCGGCGTCGT ACGCGCAGAC
GGCGGCTATC CGTTCACAAA CATAACAGCA GCCCACACTT TTGTGGTGAC TTTCACTGCA
GACGAGGCAT ACACCGTTAC TGTCGGGGCA ACTAGCAACG GCACCGTGAC TCCAGGCACC
GAGTCGATAG TAAAAGGGAA AAGTGCCACC TTCTACTTCA CCCCTGCAGC CGGCTATGCT
ATCCGCGACG TCAAGGTTGA CGGCACATCT GTTGGGACTC CCAGCTTTTT CACCTTCGCA
GATGTGGCGA CAAACCACAG CCTTGATGTT ACTTTCGGCA ATGCCGTCAC CTTGGCCACC
ACCGTCACCA ATGGCAGCGT CAAGATCAAC GGTACGACGG CAACCGCCAG TACTTCGGTT
GCCTCTGGCT CCAAGCCTCA GATTGACGTG GTGCCAAACG CCCACTACAA ACTGTACCGA
CTCCAGGTCG GTGGTATCAA TGTCACTGGC AGCGCAGTTA AGAATGCCGA TGGCTCATAT
ACCTATGCAC CGGCCAATGC CATGCTTGCA AACACCACAA TCAGTGCCAC GTGCTCTGCA
ATCTACTGGG CGCTTAACGG CACTGCGGGT GCAAACGGAA GGATAGGCGT CAGCTCTACC
CAGATCATGG ATGGCAATAG TTACTTTATA AACATAACGC CAGACAGCGG TTACAAGATC
GAAACCGTGA CTGACAATGG AACGGATGTA ACGACGCAGG TTAGTAATGG CGGGTATAAT
GTCGCCAACA TTACAACAAA CCATGCAGTA GCGGTAACTT TCGTAGCGAA ATAA
|
|---|
| Protein sequence | MDKTSYFFTA NCGACHPGGA ATQYDRNGNL YFNRTTNLFG YLGGVAALTD PAAKLDGDYG
FINPSTGVPG TAAWSKTGIM EPDCLMCHMN KYDTTTKTVV DATKNYVVFN NNDMGASWHK
RAATARGISV AGVANFDSAA TLGAGWGQVT YATTVADGTP PMATAITINY GLGTTAGTLV
ADSGNNYVIP TGVIGAAGNA NCRGCHTSPD GKKSGRTTLA TTDVHSALAC TRCHATPNTG
TKDSLGVATG NTHQVGKGNI TIGTIRNDLD NTVKSCENCH LDGGDAAAPN PSAAHLNKVP
GSHMNFLNCQ VCHIRFVSAG STTAPTIPEQ VIEMASNGTQ NISKLNAYLG TDPLDPTKNL
VDLTGQPFRW YPGLKWWGNK ITTVKPLYTA WFGEWISGEG SAAVIRPINL RLVRKGMTDQ
YAQNVARLAS LPLTAGTQVA NGAPILHRKE EIKAALVRMS TVTDTAGTSN DKIATRPVLV
RADKVYFLNA AGEVEYFEST VAESHDFAVN HNVVAKRDAA NPVVKPGPYG SGGCTDCHGN
SSPFFHGMQL AEPAQYDYLD EAGTVANTNA GKPIYKPHYK TMGYTEFRAK QLTADIVPAI
TRVIGQGSVA VSEGANSCTT AGGNECAIGA TPASDVTFTA TSAPGQAFVK WSGCTPSQSD
PLSCTANVGT PASGAENRGI LVTATFTEPA APAPPPAVTT FTLSASSVTV GGTKGGTLGA
TSIDVASGSD YFISVRPEAG YTVTAATVDG ADVLGVVRAD GGYPFTNITA AHTFVVTFTA
DEAYTVTVGA TSNGTVTPGT ESIVKGKSAT FYFTPAAGYA IRDVKVDGTS VGTPSFFTFA
DVATNHSLDV TFGNAVTLAT TVTNGSVKIN GTTATASTSV ASGSKPQIDV VPNAHYKLYR
LQVGGINVTG SAVKNADGSY TYAPANAMLA NTTISATCSA IYWALNGTAG ANGRIGVSST
QIMDGNSYFI NITPDSGYKI ETVTDNGTDV TTQVSNGGYN VANITTNHAV AVTFVAK
|
|---|
| |