Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_2808 |
Symbol | |
ID | 6782807 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | - |
Start bp | 3237979 |
End bp | 3238821 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642768802 |
Product | Silent information regulator protein Sir2 |
Protein accession | YP_002139608 |
Protein GI | 197119181 |
COG category | [K] Transcription |
COG ID | [COG0846] NAD-dependent protein deacetylases, SIR2 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0484605 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATCTCT CCAGGAGTTT CGAACAGGCG GCGGAACTGG TGGCGCAGGC CAAGGCGCTG GTCGTGACCG CCGGAGCTGG CATGGGGGTG GATTCGGGGC TGCCGGATTT CCGCGGCGAC CAGGGGTTCT GGACCGCGTA TCCCTTGTAC CAGAGGCTCG GCATCAGCTT CGTCGATGCG GCGAACCCGG AGCATTTCGA GCGCGATCCC CGCTTCGGCT GGGGGTTCTA CGGCCACCGC ACCAACCTGT ACCGGGAAAC TGTCCCGCAC CCGGGCTTCC AACTGCTGCT CGATTGGGCC AAGCGCTGCC GGCTCGACTG CTTCGTCGCC ACCTCCAACG TCGACGGCCA GTTCCAAAAG GCCGGCTTCG CCGCAGACGC CGTGCTGGAA TTCCACGGCT CCATCCATCA CCTCCAGTGC ACCAGGCCCT GCAGCAGCGC CATCTGGGAG AACAGGGAAG AGTTCCGGAT CGACACCGAG ACAATGCGGG CCGACCATGT CCCGCTTTGC CCCCGTTGCG GTTCATCCGC ACGCCCCAAC ATCCTCATGT TTGGCGATTA CTGCTGGATC GACGACCGCA CCATGCGCCA GCAGGAGCGC TTCCGGCAGT TCCTCTCCCG GCAGGGGGCG GGGAGGATCG TGGTGGTCGA GATGGGAGCC GGGACCGCCA TCCCCACCGT GCGCGCCGCC AGCGAGCGGA TCGGCGCCCT GGCCCATGGG CGCGTCATCA GGATCAACCC GCGCGAGCCG CAGATTTCCA AACCTCACCT CTCCCTTCCC TGCGGAGCCC TGGAGGGGCT TAACGGAATA GAGGAGATGC TCCGCCTTCG CTCAAGGCCC TGA
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Protein sequence | MDLSRSFEQA AELVAQAKAL VVTAGAGMGV DSGLPDFRGD QGFWTAYPLY QRLGISFVDA ANPEHFERDP RFGWGFYGHR TNLYRETVPH PGFQLLLDWA KRCRLDCFVA TSNVDGQFQK AGFAADAVLE FHGSIHHLQC TRPCSSAIWE NREEFRIDTE TMRADHVPLC PRCGSSARPN ILMFGDYCWI DDRTMRQQER FRQFLSRQGA GRIVVVEMGA GTAIPTVRAA SERIGALAHG RVIRINPREP QISKPHLSLP CGALEGLNGI EEMLRLRSRP
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