| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2776 |
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| Symbol | |
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| ID | 6782775 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 3201507 |
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| End bp | 3202769 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642768770 |
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| Product | tRNA pseudouridine synthase D TruD |
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| Protein accession | YP_002139576 |
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| Protein GI | 197119149 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0585] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00094] tRNA pseudouridine synthase, TruD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.664077 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGAAAG AGCAGCTGGT ACTGGGTATG ATGCTGTGGT TGCGGAAACG GATTCAGGGA
GGGGCATTGT CCATATATCT TACAGCAGAG GTCCCGGGGA CCGGCGGCAC CATCAAGGGG
AGCCCGGAAG ATTTCCTGGT CGAGGAGATC CCGGCCTATC TGCCGAGCGG GCAGGGGGAG
CACTGTTTCG CGGTCCTGGA AAAGCGCGGC ATTGCGACGC TTGAGGCGCT GCGCCGCATC
GCGAAGACCC TGGGTGTCCA GGAGCGCGAT TTGGGCTACG CCGGGATGAA GGATGCCATT
GGCGTCACCC GTCAAACCGT CTCCATACCG CGCGTGGCGC CCGATAAGGT GCTGGCGCTT
GAGATTCCGG GGATCAAGAT CCTCTCGGCC CGTATGCATG GCAACAAGTT GAGGCTCGGT
CACCTCAAGG GAAACCGTTT CGTCATCAGG GTCCGCGACG TGGCCCAAGG CGCGGTCAAG
AATGCGGAGG CCGCGTTGGA GGTCATGACC AGGCGCGGGG TACCCAACCG TTTCGGGGTC
CAGCGCTACG GTGCCCAAGG CAACACCCAC GAGATAGGGG CGGCGATGCT GCGCCGCGAG
TTCAAGTCGG CGGTGGACCG GCTGATCGGC GACCCGGCTG CGGTGACCGA CGAGCGCTGG
CGCCAGGCCA TAGAGGCGTA CCGGCGCGGC GAAGTGGAGG AAAGCCTGGC GCTTTTCCCG
GGGCATTTCC GGGTCGAGCG CGAACTGCTC ACCCGGCTAG TGCAGCGTCC GGACGGCTTC
GAGAGGGCCT TCAACTCGGT GCAGCCGCGC ATGAAGAGGT TGTATCTCTC CGCCTTCCAG
TCCTCCCTCT TCGACCTGGT GTTGGAAAAA AGGCTCGATA GCTTCGACAA GGTGAACGTC
GGCGACATCG CCTTCAAGCA CGAGAACGGC GCCCGTTTCC TGGTGCAGGA TCTGGCAGCG
GAGGCGCCGC GCGCCGAAGC CTTCGACATT TCCCCCACCG GCCCCATGTT CGGCTGCACC
ATGATGGAGC CTCACGGCGC GCAGGGCGAG CTTGAGCGCG AGGTGCTGGC AGCGCAAGAG
TTAACCCTGG AGAGCTTCAA CCTCTCGGGA GGTCTGCGTA TGGAAGGGGA GCGGCGCCCA
TTGCGGGTCC CTATCGCCGG GGCGGATGTG CAGCAGGAGG GCTCCGACCT GTTGGTCGGC
TTCTCGCTGC CGCGAGGCGC CTACGCCACC TGCGTCATGA GCGAGATAAT GAAGAGCGAA
TAG
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| Protein sequence | MLKEQLVLGM MLWLRKRIQG GALSIYLTAE VPGTGGTIKG SPEDFLVEEI PAYLPSGQGE
HCFAVLEKRG IATLEALRRI AKTLGVQERD LGYAGMKDAI GVTRQTVSIP RVAPDKVLAL
EIPGIKILSA RMHGNKLRLG HLKGNRFVIR VRDVAQGAVK NAEAALEVMT RRGVPNRFGV
QRYGAQGNTH EIGAAMLRRE FKSAVDRLIG DPAAVTDERW RQAIEAYRRG EVEESLALFP
GHFRVERELL TRLVQRPDGF ERAFNSVQPR MKRLYLSAFQ SSLFDLVLEK RLDSFDKVNV
GDIAFKHENG ARFLVQDLAA EAPRAEAFDI SPTGPMFGCT MMEPHGAQGE LEREVLAAQE
LTLESFNLSG GLRMEGERRP LRVPIAGADV QQEGSDLLVG FSLPRGAYAT CVMSEIMKSE
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