Gene Gbem_2524 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_2524 
Symbol 
ID6782521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand+ 
Start bp2926059 
End bp2926664 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content55% 
IMG OID642768519 
Productisochorismatase hydrolase 
Protein accessionYP_002139328 
Protein GI197118901 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACCG AAAAATTCAC AGCGACAAAC GCAGCCATGC TTCTCATCGA TCATCAAGTC 
GGAACCCTAA GTTGGTGCTG CAACATCCCT CAAGAATTGA TCAAAAATAA CACACGTGCG 
CTGGCTCGCG CAGCGAAGGC GCTGGATATG CCTCTGATTC TCACAAGCAG CATGGAAGAA 
TACACACAGG GGCCCCTACT CAAGGATTTG GAAGAGATCG CACCGGAAGA GTACGCTCGC 
CGGGTGAAGC GGTTCGGGGT AGTGAACGCT TGGGATGATC CCAACTACAA GGCGGCTGTC 
ATGGCAACCG GACGGCGGAA TCTCATCATC GCGGGTCTCA CTAACGATGT TTGCATCGTT 
TACCCGGCGA TAAGCGCAGT AGAGGAAGGC TTCAGCGTGC AGGTAGTAGT CGATGCCGGC 
GGTTCTCCGA CCCAGATCGC AGATGAAACC GCCTTGAGGC GCATGGAGCG TGCGGGGGTG 
ACTCTCACGT CGACCAATCA GCTCATCGCC GAGCTGGCGG GCTCGTGGAC AAACGAAGGC 
GGCTCCAAAC TGATCCAGAT ATTGTTCGAA GAAGTGTTGG TACACCTCGG CAAACCGTCT 
GCCTAA
 
Protein sequence
MKTEKFTATN AAMLLIDHQV GTLSWCCNIP QELIKNNTRA LARAAKALDM PLILTSSMEE 
YTQGPLLKDL EEIAPEEYAR RVKRFGVVNA WDDPNYKAAV MATGRRNLII AGLTNDVCIV 
YPAISAVEEG FSVQVVVDAG GSPTQIADET ALRRMERAGV TLTSTNQLIA ELAGSWTNEG 
GSKLIQILFE EVLVHLGKPS A