| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2431 |
|---|
| Symbol | |
|---|
| ID | 6782428 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | - |
|---|
| Start bp | 2819365 |
|---|
| End bp | 2819937 |
|---|
| Gene Length | 573 bp |
|---|
| Protein Length | 190 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 642768426 |
|---|
| Product | Tetratricopeptide TPR_2 repeat protein |
|---|
| Protein accession | YP_002139235 |
|---|
| Protein GI | 197118808 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG4235] Cytochrome c biogenesis factor |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.232516 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCAAGG AAAATTTACT CACCGTAGCA GTGGCTCTGA TCGTCGGCAT GCTCGGCGGC
TACATCATCT TCAACGTGGC CGGCAACAAG AACCTTCCTT CCAACGCGGC TGTGCCGCAG
GGAACAGGTT CCCCGACCGA TTACCAGCGG CGCATCGTCG AGGCCGAGAA GATCGTGGCT
CAGGACCCGA AAAACCTGCA GGCATGGTCC CAGCTCGGCA ACGACTACTT CGACACCGAC
CAGCCCCAAA AGGCGGTCAA CGCCTACGGG AAGGTGCTGG AGCTCGATCC CAACAACGTG
AACGTCATGA CCGACCAGGG GATCATGTAC CGCAAGATCG GCTGGTACGA CAAGGCGATC
GCCAACTTCG AGAAGGCTCA AGCCATCGAC CCCAAGCATC TGCAAAGCCT ATACAACCTG
GGCGTGGTCT ACTACATGGA CCTGAAGCAG TACGACAAGG CCAAGGCGGT CTGGACCAAG
TATCTGCAGT TCGACTCCAC GAGCCCCACC GCCCAGCAGA TCAAGAACGA CATGGCGAAC
CTGACCCAGA TGCCTGGGAG CTTCAAGAAG TAG
|
|---|
| Protein sequence | MSKENLLTVA VALIVGMLGG YIIFNVAGNK NLPSNAAVPQ GTGSPTDYQR RIVEAEKIVA
QDPKNLQAWS QLGNDYFDTD QPQKAVNAYG KVLELDPNNV NVMTDQGIMY RKIGWYDKAI
ANFEKAQAID PKHLQSLYNL GVVYYMDLKQ YDKAKAVWTK YLQFDSTSPT AQQIKNDMAN
LTQMPGSFKK
|
|---|
| |