Gene Gbem_2406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_2406 
Symbol 
ID6782404 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp2784566 
End bp2786887 
Gene Length2322 bp 
Protein Length773 aa 
Translation table11 
GC content60% 
IMG OID642768403 
Productmulti-sensor hybrid histidine kinase 
Protein accessionYP_002139212 
Protein GI197118785 
COG category[T] Signal transduction mechanisms 
COG ID[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACACG CACTGCGTAT CCTGATCGTG GACGATTCCC CCGAAGATGC CGCACTCATC 
GTGCGTCAAC TGCAGGGAGA GTTCTCTATT AGCTACGAGC GCGTCGAGAC CCCTGACGAA
ATGGAGGCGG CACTGGACAA GGGGGGATGG CACATCGTCA TCTCGGACTA CGTCATGCCC
AAGTTCAGCG GGCTCGCGGC GCTCAAGCTT CTTCACGACC GGGGAATGGA CCTCCCTTTC
ATCATGGTCT CCGGGCAGAT GGGAGAGGAC GCCGCCGTAG AGGCGATGCG AGCCGGCGCA
CATGACTACT TGCTGAAGGA CAGGCTCTCC AGGCTGATCC CCGCGATCAA GCGGGAATTG
AACGACGCCG TGGTGCGCCG CGAGAGGAGA ATGGCCGAGG AGGCCCTCTC GGCGACGGAG
GCGCGCTTCC ACAGCCTGGT GGAGCAGTCC CTGGTCGGCA TATTCATGCT GCAGGACGAC
GTCTTCATCT ACGTGAACCC CAAGTTCGGC GAGATCTTCG CCTACGAGCC GCAACAGCTG
ATCGAATCGA GATCTCTGCT GGAACTGGTG GCGCCGGAAG ATCAGATCAG GGTGATGACC
CGGTTTCTGC GCCCCCTCAT GGAGGAAAGC GACAGTCTGC ACTTCTTCTT CCGAGGCAAG
CGCCGCGACG GGTCCCTGAT CGATCTCGAG GTGAACGGCA CCCGGACCAG GGTAAACGGC
AGCGCTGCCA TCATAGGGAC CCTGCTCGAC ATAACCGAGC GCAAACGCGC CGAAGCGGAA
CTGAGCAAGC TGTGGCGCGC CGTCGAGCAA AGCCCGGTAT CGGTGGTGAT AACAGATCTC
TTCGGCAGGA TCGAGTACGT GAACCCGAAG TTCATCGAGG TGACCGGCTA CGCCGAGGAG
GAACTGATCG GGAAAAACCC GAGCATCCTG AAATCCGGGA TGACCGACGC CAAGGTGTAC
GAGGAGCTCT GGTCTACAGT AACCTCTGGC CGGGAGTGGC ACGGCGAGCT GCACAACAAG
AAAAAGAACG GGGAGCTATT CTGGGAAAAC GGGCATATCT CCGCCATCAA GAACGCCGAG
GGGCAGATCA CCCATTTCGT CGGGGTCAAG GAGGACGTAA CCGAGAGAAA GCTTGCCATC
GACCAGCTGA GGCAGGTACA AAAGATGGAG GCCATAGGCC AGCTGGCAGG CGGCATCGCC
CACGACTTCA ACAACCTCCT CACCGTCATC AACGGTTATT CGACGCTCCT GGTGAGATCC
CTCGACAAGG GTTCGCCCAC GCACAAGGAA GCGGAGCAGA TCCTGCGTGC CGGCGAGCGT
GCCGCAGATC TTACCAGGCA GCTGTTGAGC TTCAGCAGAA GGCAGATCAT GGAGCCGAGG
GTGCTGGACA TCAACAAGCA GGTGAGAGCG GTACAGAAGA TGCTGGAACG GCTGATCGGG
GAGCATATCG GGCTCGTCAC CACCCTCTCC GAGGACGCCG GCTTCATCAG GATGGACCCG
GGGCAGATGG AACAGATCGT CATGAACCTG ATCGTCAACG CCCGCGACGC CTCGGAGACC
GGCGGGGTGA TCACCATGGC CACGGAGAAG GTCGACCTGG ACCAGAATTT CTCACACCTG
CACCCCGGGT CGGTTCCCGG AAGCTACGTC AGGCTGAGCG TGGCGGACCA GGGGCAAGGG
ATGACCGAGG AGGTAAAGCA GCGCCTCTTC GAACCCTTCT TCACCACGAA GGAGATGGGT
CGCGGCACGG GCTTGGGTCT CGCCACCGTG TACGGCATCG TGAAGCAAAG CGGAGGTTAC
ATCGAGGTGG TCAGCGAACC GGGACAGGGA GCCTGCTTCA ACATCTATCT CCCCCGCGCC
TCGGAGCCCG CCCCCGCGCC GCCTGCGCCG CCGGTCGACG AAGAGATAGA TTCCTCCCAC
GTCATACTCG TCGTGGAGGA CGAACCGGGG GTGCTCAACC TGGTGGTGCA CACCTTGCGC
ATGCGTGGTT TCACCGTCTA TGAAGCCACG GACCCGGACC AGGGGATCAC CCTTTTCGAG
AAGCACGCCA CTGAGATTGA CATGCTCCTC ACCGACGTGG TAATGCCGTT CATGAGCGGC
CCTGCCCTGG CTGAGCTGTT GCTCTCCAAA AAACCGGGAT TGAAGGTGCT GTTCACGTCC
GGGCACACCG ACGACAGGGC AGGTTTCGAG AAAATATTGG AAAAAGGGAT GCAGTTCCTG
CCCAAACCGT TTGCCAGCGA CGCCCTGATC CGAAAGGTGA GGGACACCCT GAACGGAGGC
ACTGCAAAGA CGGCAGGAGC GATTTCAGGA GGTAGCGATT GA
 
Protein sequence
MKHALRILIV DDSPEDAALI VRQLQGEFSI SYERVETPDE MEAALDKGGW HIVISDYVMP 
KFSGLAALKL LHDRGMDLPF IMVSGQMGED AAVEAMRAGA HDYLLKDRLS RLIPAIKREL
NDAVVRRERR MAEEALSATE ARFHSLVEQS LVGIFMLQDD VFIYVNPKFG EIFAYEPQQL
IESRSLLELV APEDQIRVMT RFLRPLMEES DSLHFFFRGK RRDGSLIDLE VNGTRTRVNG
SAAIIGTLLD ITERKRAEAE LSKLWRAVEQ SPVSVVITDL FGRIEYVNPK FIEVTGYAEE
ELIGKNPSIL KSGMTDAKVY EELWSTVTSG REWHGELHNK KKNGELFWEN GHISAIKNAE
GQITHFVGVK EDVTERKLAI DQLRQVQKME AIGQLAGGIA HDFNNLLTVI NGYSTLLVRS
LDKGSPTHKE AEQILRAGER AADLTRQLLS FSRRQIMEPR VLDINKQVRA VQKMLERLIG
EHIGLVTTLS EDAGFIRMDP GQMEQIVMNL IVNARDASET GGVITMATEK VDLDQNFSHL
HPGSVPGSYV RLSVADQGQG MTEEVKQRLF EPFFTTKEMG RGTGLGLATV YGIVKQSGGY
IEVVSEPGQG ACFNIYLPRA SEPAPAPPAP PVDEEIDSSH VILVVEDEPG VLNLVVHTLR
MRGFTVYEAT DPDQGITLFE KHATEIDMLL TDVVMPFMSG PALAELLLSK KPGLKVLFTS
GHTDDRAGFE KILEKGMQFL PKPFASDALI RKVRDTLNGG TAKTAGAISG GSD