| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2406 |
|---|
| Symbol | |
|---|
| ID | 6782404 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | + |
|---|
| Start bp | 2784566 |
|---|
| End bp | 2786887 |
|---|
| Gene Length | 2322 bp |
|---|
| Protein Length | 773 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642768403 |
|---|
| Product | multi-sensor hybrid histidine kinase |
|---|
| Protein accession | YP_002139212 |
|---|
| Protein GI | 197118785 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACACG CACTGCGTAT CCTGATCGTG GACGATTCCC CCGAAGATGC CGCACTCATC
GTGCGTCAAC TGCAGGGAGA GTTCTCTATT AGCTACGAGC GCGTCGAGAC CCCTGACGAA
ATGGAGGCGG CACTGGACAA GGGGGGATGG CACATCGTCA TCTCGGACTA CGTCATGCCC
AAGTTCAGCG GGCTCGCGGC GCTCAAGCTT CTTCACGACC GGGGAATGGA CCTCCCTTTC
ATCATGGTCT CCGGGCAGAT GGGAGAGGAC GCCGCCGTAG AGGCGATGCG AGCCGGCGCA
CATGACTACT TGCTGAAGGA CAGGCTCTCC AGGCTGATCC CCGCGATCAA GCGGGAATTG
AACGACGCCG TGGTGCGCCG CGAGAGGAGA ATGGCCGAGG AGGCCCTCTC GGCGACGGAG
GCGCGCTTCC ACAGCCTGGT GGAGCAGTCC CTGGTCGGCA TATTCATGCT GCAGGACGAC
GTCTTCATCT ACGTGAACCC CAAGTTCGGC GAGATCTTCG CCTACGAGCC GCAACAGCTG
ATCGAATCGA GATCTCTGCT GGAACTGGTG GCGCCGGAAG ATCAGATCAG GGTGATGACC
CGGTTTCTGC GCCCCCTCAT GGAGGAAAGC GACAGTCTGC ACTTCTTCTT CCGAGGCAAG
CGCCGCGACG GGTCCCTGAT CGATCTCGAG GTGAACGGCA CCCGGACCAG GGTAAACGGC
AGCGCTGCCA TCATAGGGAC CCTGCTCGAC ATAACCGAGC GCAAACGCGC CGAAGCGGAA
CTGAGCAAGC TGTGGCGCGC CGTCGAGCAA AGCCCGGTAT CGGTGGTGAT AACAGATCTC
TTCGGCAGGA TCGAGTACGT GAACCCGAAG TTCATCGAGG TGACCGGCTA CGCCGAGGAG
GAACTGATCG GGAAAAACCC GAGCATCCTG AAATCCGGGA TGACCGACGC CAAGGTGTAC
GAGGAGCTCT GGTCTACAGT AACCTCTGGC CGGGAGTGGC ACGGCGAGCT GCACAACAAG
AAAAAGAACG GGGAGCTATT CTGGGAAAAC GGGCATATCT CCGCCATCAA GAACGCCGAG
GGGCAGATCA CCCATTTCGT CGGGGTCAAG GAGGACGTAA CCGAGAGAAA GCTTGCCATC
GACCAGCTGA GGCAGGTACA AAAGATGGAG GCCATAGGCC AGCTGGCAGG CGGCATCGCC
CACGACTTCA ACAACCTCCT CACCGTCATC AACGGTTATT CGACGCTCCT GGTGAGATCC
CTCGACAAGG GTTCGCCCAC GCACAAGGAA GCGGAGCAGA TCCTGCGTGC CGGCGAGCGT
GCCGCAGATC TTACCAGGCA GCTGTTGAGC TTCAGCAGAA GGCAGATCAT GGAGCCGAGG
GTGCTGGACA TCAACAAGCA GGTGAGAGCG GTACAGAAGA TGCTGGAACG GCTGATCGGG
GAGCATATCG GGCTCGTCAC CACCCTCTCC GAGGACGCCG GCTTCATCAG GATGGACCCG
GGGCAGATGG AACAGATCGT CATGAACCTG ATCGTCAACG CCCGCGACGC CTCGGAGACC
GGCGGGGTGA TCACCATGGC CACGGAGAAG GTCGACCTGG ACCAGAATTT CTCACACCTG
CACCCCGGGT CGGTTCCCGG AAGCTACGTC AGGCTGAGCG TGGCGGACCA GGGGCAAGGG
ATGACCGAGG AGGTAAAGCA GCGCCTCTTC GAACCCTTCT TCACCACGAA GGAGATGGGT
CGCGGCACGG GCTTGGGTCT CGCCACCGTG TACGGCATCG TGAAGCAAAG CGGAGGTTAC
ATCGAGGTGG TCAGCGAACC GGGACAGGGA GCCTGCTTCA ACATCTATCT CCCCCGCGCC
TCGGAGCCCG CCCCCGCGCC GCCTGCGCCG CCGGTCGACG AAGAGATAGA TTCCTCCCAC
GTCATACTCG TCGTGGAGGA CGAACCGGGG GTGCTCAACC TGGTGGTGCA CACCTTGCGC
ATGCGTGGTT TCACCGTCTA TGAAGCCACG GACCCGGACC AGGGGATCAC CCTTTTCGAG
AAGCACGCCA CTGAGATTGA CATGCTCCTC ACCGACGTGG TAATGCCGTT CATGAGCGGC
CCTGCCCTGG CTGAGCTGTT GCTCTCCAAA AAACCGGGAT TGAAGGTGCT GTTCACGTCC
GGGCACACCG ACGACAGGGC AGGTTTCGAG AAAATATTGG AAAAAGGGAT GCAGTTCCTG
CCCAAACCGT TTGCCAGCGA CGCCCTGATC CGAAAGGTGA GGGACACCCT GAACGGAGGC
ACTGCAAAGA CGGCAGGAGC GATTTCAGGA GGTAGCGATT GA
|
|---|
| Protein sequence | MKHALRILIV DDSPEDAALI VRQLQGEFSI SYERVETPDE MEAALDKGGW HIVISDYVMP
KFSGLAALKL LHDRGMDLPF IMVSGQMGED AAVEAMRAGA HDYLLKDRLS RLIPAIKREL
NDAVVRRERR MAEEALSATE ARFHSLVEQS LVGIFMLQDD VFIYVNPKFG EIFAYEPQQL
IESRSLLELV APEDQIRVMT RFLRPLMEES DSLHFFFRGK RRDGSLIDLE VNGTRTRVNG
SAAIIGTLLD ITERKRAEAE LSKLWRAVEQ SPVSVVITDL FGRIEYVNPK FIEVTGYAEE
ELIGKNPSIL KSGMTDAKVY EELWSTVTSG REWHGELHNK KKNGELFWEN GHISAIKNAE
GQITHFVGVK EDVTERKLAI DQLRQVQKME AIGQLAGGIA HDFNNLLTVI NGYSTLLVRS
LDKGSPTHKE AEQILRAGER AADLTRQLLS FSRRQIMEPR VLDINKQVRA VQKMLERLIG
EHIGLVTTLS EDAGFIRMDP GQMEQIVMNL IVNARDASET GGVITMATEK VDLDQNFSHL
HPGSVPGSYV RLSVADQGQG MTEEVKQRLF EPFFTTKEMG RGTGLGLATV YGIVKQSGGY
IEVVSEPGQG ACFNIYLPRA SEPAPAPPAP PVDEEIDSSH VILVVEDEPG VLNLVVHTLR
MRGFTVYEAT DPDQGITLFE KHATEIDMLL TDVVMPFMSG PALAELLLSK KPGLKVLFTS
GHTDDRAGFE KILEKGMQFL PKPFASDALI RKVRDTLNGG TAKTAGAISG GSD
|
|---|
| |