| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2355 |
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| Symbol | |
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| ID | 6782354 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 2732672 |
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| End bp | 2734021 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642768354 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_002139163 |
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| Protein GI | 197118736 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0530772 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGACAGA ACCATATCCC GCGCCTGCTG AAACTGGCAG GCCCCATGAT CCTTTCCACT
TCCACCATAA CCTTGATGCA GATTATCGAC GCCCTGATCC TGGCACGGCA CTCCAGCGAG
GCTGTGGCGG CGATCGGTCC TTCCGGTCTC GCCGTCATCC TGTTCCAGGG CTTTCTCTTC
GGGACCGCCG GCTACGCTGG AACCTTCGTC GCGCACAACC ATGGGCGAGG CGACGCCCGC
GGGGTCCGCA GGTCCGCTTG GCTCGGCATC CATACCTCGC TCGCCTCCGG AATCCTGGCC
CTTGCCATTG CCTGGCCGCT GGCGCAACTT TTCCTGCTGG CGGGGCACGA GGCGCAGGTC
GCACGCGACG AGCAGGTTTA CTTCCTGCTT TGCATGGCCG GCTCCTTGTT CCCGGTTCTT
AGCTCGGCAT TGGGGGGGTG GCTCTCGGGC ATAGGGCGCC CCGCTTTGGT AACGGCGGTG
ACCTTCATCT CCCTGATTGT GAATGCGCTT CTTGCCTGGG GGCTCGTCCT CGGTGCGTGG
GGCTTCCCCC GGATGGGGAT TGCCGGCGCC GCGGTTGCCA CCGTCAGCGC CCAAGGGGTT
GCCGCCGCGC TTTACCTGGG CATCTTCGCC ATAGGCGGTG GGTTCACCGA CCGGATCGCC
CGGCGGCTGG ACTGGGCGGA GTGGCACCGT TTCCTCGCGC TGGCGACCCC GATGGGGCTC
AGGATCAGCG GCGAACTCAC CGCATGGACC CTTTTCCTCG TGGCGATCGG CCGCCTGGGC
ACGGTGGAGC TTGCCGCCTC CAGCATCGCT TTCCGGATCA ACGGGCTGGC GTTTTTCCCG
GCGCTGGGGC TAGGACAGGC CGCGGGAATT CTGGTGGGCC ATGCTCGTGG GGGAGGGGAA
GACGATCAGG TACCGGCCAT CGCGTGGCAA TCCCTTTTGA TCTGTGAGGT ATGGATGCTC
GCTATGGCTA TCCTCTTTGC CACGGCGTCG GCGCCTCTCA TGTCCGTCTT TGCAGGGTAT
GGGGGCGACG CCGCGCGCAT CGTGGCCGCA GGCTCCCTGA TCATGAAGTT CGTCGCCTTC
TACTGCCTCT TCGATGCCGC CAACGTCATG ATAGGCTGCG TGCTGGCCTC GGCGGGGGAC
ACCTGCTGGA TCGCCCGTAC CTTCCTCTAC TCATCTGCCG GATTCCTGGT TTTCTTGTGG
CTCATCGACC GCACCATGCC GGGGCTGGTT GCCGAGTGGA CCCTGGCCAC CTTCTTCGTA
TTCGTCACCG CAATCATCTG GTCGCTGCGT TTTCGTTTCG GCGCCTGGAG GCGGACCCGA
ATTCTGCACG AACCCGAGCT GCCGGCTTAG
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| Protein sequence | MRQNHIPRLL KLAGPMILST STITLMQIID ALILARHSSE AVAAIGPSGL AVILFQGFLF
GTAGYAGTFV AHNHGRGDAR GVRRSAWLGI HTSLASGILA LAIAWPLAQL FLLAGHEAQV
ARDEQVYFLL CMAGSLFPVL SSALGGWLSG IGRPALVTAV TFISLIVNAL LAWGLVLGAW
GFPRMGIAGA AVATVSAQGV AAALYLGIFA IGGGFTDRIA RRLDWAEWHR FLALATPMGL
RISGELTAWT LFLVAIGRLG TVELAASSIA FRINGLAFFP ALGLGQAAGI LVGHARGGGE
DDQVPAIAWQ SLLICEVWML AMAILFATAS APLMSVFAGY GGDAARIVAA GSLIMKFVAF
YCLFDAANVM IGCVLASAGD TCWIARTFLY SSAGFLVFLW LIDRTMPGLV AEWTLATFFV
FVTAIIWSLR FRFGAWRRTR ILHEPELPA
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