Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_2345 |
Symbol | |
ID | 6782344 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | - |
Start bp | 2720210 |
End bp | 2724982 |
Gene Length | 4773 bp |
Protein Length | 1590 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642768344 |
Product | Tfp pilus assembly protein tip-associated adhesin PilY1-like protein |
Protein accession | YP_002139153 |
Protein GI | 197118726 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3419] Tfp pilus assembly protein, tip-associated adhesin PilY1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGACGC TGTTCGCCAC CTTAGTCACC TGCCTCATTT TCGGATGCCT GGCGGCGTCG GCGTTTGCCG CACCCCAGAT CCTCGGCAGT TCCCTTTCCC CGGCAAGCGG TGCCACCAAT GTTGACCCAG CTGTGGTCGA CACCATATGG GCTGAGTTCG ATGATGCCCG AATGGACAAG GACAGCTTCT CCGGCAGGAT CAGCGTCGAC AACGGCGCCA AGTATTCGGT GAGCCTGGTT AACGACTCAA AGGGGGACTG GGTCAAGATC AGCCTGAAGA ACAACCTCCA GTACAGTACC ACCTACACGG TCAGCATCGA TTACAGGGTG CAGAACAAAA GCGGCACTAA GATGGGTTCC AATTACAGCT GGAGTTTCAC CACCAAGGCG AAACCTTCCA CGGACACCAC TGCTCCTGTG GTTACGGCAA CCTTCCCAGC CAGTTCCGCC ACCGACGTTC CTATTGCCTC CGACATCAGC ATCACCTTCA GCGAGGTGAT GGACCCTCTC AGCATCACCA CCTTCAGCAT CAGCGTCAAT AACGGCACTG TCAGCGGCAC GGTTTCCCTC GACGACACCC AAAAGATCGC CACCTTCCAT CCCACCTCCA GCCTCAATCC CGACACACCC TACACCGTCA CCGTCAGCAG CACAGTCGGT GATGCAGCGG GGAACAGGTT GCCTGGAGAT TACACCTTTA CCTTCCGCAC CCTCAAGGTA GACAGCATCG CTCCGAGGGT GGTTTCCGTC ACCCCTGTCT CCGGCGCCAC CGGTGTCGCA ACCGGCGCGT CCATAAGCGC CACCTTCAGC GAGGCCGTCA GCGCCGGCAC CATATCGTCC AGCAGCTTCA GCGTAAGCGG TGTGAGCGGC ACGGTGAGCT ATAACCCCTC CACCTGGGTC GCCACCTTCA CACCTTCCGC GCCGCTTGCA GCAGGTTCCA CCTATACGGT GACCATTTCC ACTGCGGTGC AGGACCTCTC CGGCAACTCC CTCGCCGGCG CGAAGGTCTG GACCTTTACT ACTGCCGGGG CGACCCCGCC ACCTTCTCTC AACGACTACT GCCAGGTTCC CCCCTACGTG AGCAACGACG GAACAGGGGT CAAGCCGAAC CTGCTCCTCA TCGTCGACAA CTCGGGGAGC ATGTACGAAT TCGCCTACAA GGCGCCCGGT ACCGGTACCA GCTCATACGA CACCAGTTAC GATCCGGCCT TTCCCTACTT CGGCTACTTC GACAGCGCCA GGATGTATAA GTACAGCGGC TCCTACTTCG AGCCCGATAC TGCCGCCGCC GTCAACAAGA GCTCCTTTTG GTCGGGCAAC TTCCTGAACT GGCTCACCAT GCGCCGCGTC GACATCATTC GCAAGGTGCT CGTGGGAGGA AAGGCGCTGT CGCGTTCCAC CAACACGACC AACTACCTCA TCGCGGCGGA GGACCCGGAC CGCGACTTTT ACAAGAGCTA CAACAACGTT CGCTACACCG TCCGTGCCGG TACTTCGACC GAGGTGATCA GGGACACCAC CAACAACAGA AGCTATGACG TCAAGGTCTA CGTCGGCCAG AATCCGCCGC AGGACGGCCT GATCACGGGC TACCGGGACA AGATAAATTT CGGCCTCATG TTCTTTAACG ACGGCTACCG CTACGAAAGC GGCGTTACCG CGGTGAAGGA CGGCGGTCAC GTTGCTGTCG ATCTGGGGAC AACCGGCACC AACCTGGTCA CGCAGATAGA GAATACCGAT CCCTCCACCT GGACCCCGCT CGCGGAAACG CTCTTCGAGG CCAGCCGCTA CTTCGAAGCT GCCGACAGCG CCTACAACGG CGGGACCTAC TCGGGGAGGG ATCCGATCCA GTACCCCTGC CAGAAGAACT TCGTGATGAT CCTGACGGAC GGGGAGTCGA CCCAGGACGA GAACCTTCCG GGCGCCTCCA CCAACCTGGC CGGCAAGGTG ACAGACCCAA GCCTCGACGT GAAGAGTTGG ATGGACAGCA TCGCCAGCCA GGAAAGGTAT CCCAGCCAGT ACGCGGCGAG CGCCAACACC CAGTCGGGGA GCTACTACCT GGAAGCGGTA GCCTACTGGG CTCATAACAC CGATCTGCGC TCCTCCACCC TGGGGAAGAA TGCCCTTCCC GGCAAGCAGA ACATCACGGT CTACACGGTC TTCGCCTTCG ACGATTCCGC CATCGGCCGG GAAATACTTC AGAAGACGGC CAAGTACGGA GGGTACGACG ACTACGACTC CACCGGCAGG CCGGACAAAA CCCGCAAGTG GGACAAAAAC GGCGACGGCA TACCGGACAC CTACTTCGAG GCCCAGACCG GCTCCGTCCT CGCCGAATCC TTGCAAAACG CCTTCAACGA CATCCTGGCC CGGGTCTCCT CCGGCACAGC CGCCTCCATC CTCAGCAACA GCGAGGGGAG CGGCGCCAAC GTGCTGCAGG CCCTCTTTTA CCCGAAACGC TTCTTCGGCG CCCAGACCTC TGTGGATTGG ATCGGGGAGC TGCATAACAT GTGGTACTAC GTCGATCCCT TCATCAGCAA CAGCACCATG CGGGAGGACA GCGACTACGT CGAGGCGACG CCCTCGCCGG CGCACTACCT GAACCTCGGC CGGGATAACG TGGTCGGGTT TCGCTACAAC GCCTCGCTCG ACCGGACCAC GGCGCGGCGC TTCAGCGATG CCCAGGGGGA CGGCAGGCCC GACGTCGACA GCAACGGGGA CGGTGTCGCC GACAGCTACA CCTTCCTCGA TGAGGTGGAT GCCGACTCGG TGAAGAGCAT CTGGCGCGCC GGAAAACTTC TCTGGGAGAG GAGCGCGCCG CGCACCATCT ACACCCAGAC TGTCGGCACC CTCACCAGCT TCACCGGCCT GGACACCTCG CTCGCCTCCA CCCGCAGCCT GCTCCAGGCG GCCAATCAGA CTGAGGCGGA CAAAATCATC TCCTATATTG CGGGGACCGA CCAGGGGGGG TACCGAAACC GCACCGTGAA CATAGGCGGA ACCCCAGGGG TCTGGCGCTT GGGGGACATC GTTGCCTCGA CGCCAAAGCT GCAGTCCACG ATGAAGCTAA ATGCCTATAA CACCCCTGTC CCTGGAGGAT ACGGCGACAC CTCCTACGGC GATGACCGGC ACAAAACAGG CTTCATCTAC AGTTCCGCCT ATGCCAATCG TGGCATGGTG TACGTCGGGG CCAACGACGG AATGTTGCAC GCCTTCAAGC TTGGGAAACT CGATGTCAGC AGTTCCGGGG ACCGTCGGGC CTCTCTCTCC GGCACCGGTT TGGGGGAGGA GCAGTGGGCC TTCATCCCCA AAAACGCGCT TCCCTATCTA ACCTACTACG CGGACCCGGC ATACAAACAC CTTTACTACG TGGACGGGTC AACCATCATC AACGACGTGA GCATGGGTAA GCCTGCCGGC TGCAGCAGCG ACTACTGGAA CTGTGCCAAG GCCACGGACG GAAGCAACTG GCGCACCGTC TTGGTGGGGA GCATGGGGCT TGGCGGGGCA TCCAAGATGA AAGGTGCGGG GTGCAAGGGT ACCGACTGCG TCGAGACCCC GGCCCTCGAC CCGCTCGATG TCACCAAAGG TGTCGGGTAC TCCTCCTACT TCGCCCTCGA CGTCACGCAG CCCGAGTCGC CGTCGCTTAT GTGGGAGTTC GGGCACCAGA ACCTCGGCTT CTCCACCGCA GGGGCGGCAC TCGTGAAGAT CAGCGCCCGC AAGGCGGACA ACGTCACCCC CGACAAGTCC AAGAACGGGA AGTGGTTCGC CGTGCTCGCC TCGGGCCCTA CCGGTCCCAT TGACACCTCC AGCCACCAGT TCAAGGGGAC CTCGACCCAA AACCTCACCA TCTACGTGCT GAACCTTGAG GACGGCACGG TTGCCGCGGT GCTCGACACC CTGGTCGATG GCAGCAAGAT AGCAAACGCC TTCGCCGGCA CCATCACGAG CGGCGTCTCC GACACGGACC GGTGGAACAC CGCCTCGCCT GGGCACTACC AGGACGACGC CATTTACATC GGCTACACGC AGCTCTTAGG CACCACCTGG ACCGGGGGCG GGGTGCTGCG GGTTGTTACC GGCGAGGACC CGAATCCCCG GAACTGGAAG CTCAGCAAGG TGATCGACGG GACCGGGCCT GTTACCACCA GCGTGATCCG GCTCCAGGAC CGCAAGAACC ACAACCTCTG GCTCTACTTC GGCTCCGGGC GCTACTACTA CAACCAGGAC GACAACGACG GACAGCGCCG GCTCTACGGC GTGAAGGATC CGTGCTACAC CTCAGCGGAC CGCCTCGATG CCTCCTGCAG TTCAGGAACT TCACTGTCGC AGCTGACCAA CCAGTCAAGC ACCATATCGA ACAGCATCAG CAACCAGGGG TGGTACATAA ATCTCGCCGG TGAGCAGACT GCCGCCTCGC TCGGCGCCGA GCGTGTCGTC ACCGATCCTG TGGCGCTTAC CAACGGGGTG GTCTACTACA CCACCTACGC ACCCACCTCC GACCCCTGCG GGTTCGGGGG GACCACGGCG CTATGGGCGG CGAAGTTCGA TACCGGGGGG AATCCCCCGG CCGCGGCACT GCAGGGCAAG GTGCTGGTTC AGCTCTCCAC CGGGAGCTTC GAGGAGCTAG ACCTGGAAAA ACGGCCGCCG CACACGGACC CGCGCGAGGT GTTCGATTCC CTGGTCGGGA AAGCGTCGGC GGATTCACCC CCCATCTTCA CCAAAAGCAA CCTGAAGCCG GTGAAGCGGA TCATGCACAT CAAGGAACAC TAG
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Protein sequence | MKTLFATLVT CLIFGCLAAS AFAAPQILGS SLSPASGATN VDPAVVDTIW AEFDDARMDK DSFSGRISVD NGAKYSVSLV NDSKGDWVKI SLKNNLQYST TYTVSIDYRV QNKSGTKMGS NYSWSFTTKA KPSTDTTAPV VTATFPASSA TDVPIASDIS ITFSEVMDPL SITTFSISVN NGTVSGTVSL DDTQKIATFH PTSSLNPDTP YTVTVSSTVG DAAGNRLPGD YTFTFRTLKV DSIAPRVVSV TPVSGATGVA TGASISATFS EAVSAGTISS SSFSVSGVSG TVSYNPSTWV ATFTPSAPLA AGSTYTVTIS TAVQDLSGNS LAGAKVWTFT TAGATPPPSL NDYCQVPPYV SNDGTGVKPN LLLIVDNSGS MYEFAYKAPG TGTSSYDTSY DPAFPYFGYF DSARMYKYSG SYFEPDTAAA VNKSSFWSGN FLNWLTMRRV DIIRKVLVGG KALSRSTNTT NYLIAAEDPD RDFYKSYNNV RYTVRAGTST EVIRDTTNNR SYDVKVYVGQ NPPQDGLITG YRDKINFGLM FFNDGYRYES GVTAVKDGGH VAVDLGTTGT NLVTQIENTD PSTWTPLAET LFEASRYFEA ADSAYNGGTY SGRDPIQYPC QKNFVMILTD GESTQDENLP GASTNLAGKV TDPSLDVKSW MDSIASQERY PSQYAASANT QSGSYYLEAV AYWAHNTDLR SSTLGKNALP GKQNITVYTV FAFDDSAIGR EILQKTAKYG GYDDYDSTGR PDKTRKWDKN GDGIPDTYFE AQTGSVLAES LQNAFNDILA RVSSGTAASI LSNSEGSGAN VLQALFYPKR FFGAQTSVDW IGELHNMWYY VDPFISNSTM REDSDYVEAT PSPAHYLNLG RDNVVGFRYN ASLDRTTARR FSDAQGDGRP DVDSNGDGVA DSYTFLDEVD ADSVKSIWRA GKLLWERSAP RTIYTQTVGT LTSFTGLDTS LASTRSLLQA ANQTEADKII SYIAGTDQGG YRNRTVNIGG TPGVWRLGDI VASTPKLQST MKLNAYNTPV PGGYGDTSYG DDRHKTGFIY SSAYANRGMV YVGANDGMLH AFKLGKLDVS SSGDRRASLS GTGLGEEQWA FIPKNALPYL TYYADPAYKH LYYVDGSTII NDVSMGKPAG CSSDYWNCAK ATDGSNWRTV LVGSMGLGGA SKMKGAGCKG TDCVETPALD PLDVTKGVGY SSYFALDVTQ PESPSLMWEF GHQNLGFSTA GAALVKISAR KADNVTPDKS KNGKWFAVLA SGPTGPIDTS SHQFKGTSTQ NLTIYVLNLE DGTVAAVLDT LVDGSKIANA FAGTITSGVS DTDRWNTASP GHYQDDAIYI GYTQLLGTTW TGGGVLRVVT GEDPNPRNWK LSKVIDGTGP VTTSVIRLQD RKNHNLWLYF GSGRYYYNQD DNDGQRRLYG VKDPCYTSAD RLDASCSSGT SLSQLTNQSS TISNSISNQG WYINLAGEQT AASLGAERVV TDPVALTNGV VYYTTYAPTS DPCGFGGTTA LWAAKFDTGG NPPAAALQGK VLVQLSTGSF EELDLEKRPP HTDPREVFDS LVGKASADSP PIFTKSNLKP VKRIMHIKEH
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