Gene Gbem_2309 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_2309 
Symbol 
ID6782305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand- 
Start bp2683020 
End bp2683682 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content57% 
IMG OID642768305 
ProductHhH-GPD family protein 
Protein accessionYP_002139117 
Protein GI197118690 
COG category[L] Replication, recombination and repair 
COG ID[COG0177] Predicted EndoIII-related endonuclease 
TIGRFAM ID[TIGR01083] endonuclease III 


Plasmid Coverage information

Num covering plasmid clones0 
Plasmid unclonability p-value0.0000000091499 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGACG ATCAGATACA CCAGGCCATC GCCATCCTCA AGGATGCGGT GCTGACAAAA 
GGGTGGGTGA CTCCGGCGGT CACTATCGTG GCTACGCAGG ACCGCGACCC CTACAAGGTG 
CTGGTCTCCT GCATTCTATC CCTGCGAACC CGCGATCAGA CCACAGCCGA GGCTTCCCAG 
CGCTTGTTTG CGCTTGCCGA TACACCGCAG AAGATGACGG AACTCAGTGT CCCCGAGATC 
GAGCAGGCCA TCTACCCCGT CGGGTTTTAC CGGGTCAAGG CACAGCAGAT TTTAGAACTC 
TCGTTCCAAA TCGGTGAGCT GCACCAGGGG AGGGTGCCCG ACGAATTGGA GACCCTGCTG 
ACTTTCAAGG GAGTGGGGCG CAAGACGGCG AACCTGGTGC TGACGCTTGG ATACGGCAAG 
CCCGGCATCT GCGTCGACAT TCACGTGCAC AGGATCTGCA ACAGGTGGGG GTATGTAAAA 
ACAGTCAATC CTGAGCAGAC AGAGGGTGCT TTGAGAAAGA AGCTCCCGCC CGAGTACTGG 
ATCATAATCA ACGATCTTCT AGTGACTTTC GGGCAAAACC AGTGCACACC TGTCTCACCG 
CGCTGCTCCA CCTGTCCCCT CTATGCGCTC TGTGACAGGG TCGCTGTTAC TAAGTCTAGA 
TAA
 
Protein sequence
MKDDQIHQAI AILKDAVLTK GWVTPAVTIV ATQDRDPYKV LVSCILSLRT RDQTTAEASQ 
RLFALADTPQ KMTELSVPEI EQAIYPVGFY RVKAQQILEL SFQIGELHQG RVPDELETLL 
TFKGVGRKTA NLVLTLGYGK PGICVDIHVH RICNRWGYVK TVNPEQTEGA LRKKLPPEYW 
IIINDLLVTF GQNQCTPVSP RCSTCPLYAL CDRVAVTKSR