Gene Gbem_2210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_2210 
Symbol 
ID6782206 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp2572050 
End bp2572754 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content66% 
IMG OID642768206 
ProductABC transporter related protein 
Protein accessionYP_002139018 
Protein GI197118591 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00255017 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCCGATC CGATCATCGA GCTGACCGGG ATATGCAAAT CGTTCCAGGA GGGGGAGCGG 
GAGCGGGTGG TTTTCCGTAA CGCCTCTCTT GCCGTGGAAA CGGGCGAGTG GCTCTTTTTG
TTAGGGCGCA GCGGCTCGGG TAAATCAACC CTGCTCAACC TGTTAAGCGG CATCGACCTT
CCCGATTCGG GCGAAGTGCG GGTGGCGGGT CAGCCCCTGA ACCGCCAGAG CGAACGCGAG
CGGACCCTGT TCCGGCGCAG CAGCATCGGC TTCGTCTTCC AGTTCTACAA TCTCATCCCC
ACCTTGACCG TCCTGGAAAA CGTCCTGCTC CCCCTGGAGC TGGCCGGCCT CCTCAACCCA
GAACACGATA AATTGGCGCG CGACCTGCTG GAGCAGGTGG GACTCGCGGA CCGCGCGGCG
AGCTTTCCGG ACCGGCTGTC CGGCGGCGAG CAGCAGCGCG TTGCCGTGGC ACGCGCCCTG
GTGCACCGGC CCAAGCTGGT GCTGGCCGAC GAGCCCACCG GCAATCTCGA CGCCGAGACG
GGGCGGCAGG TGCTCGACCT TTTCCAGCGC CTGTTAAGGG AGAGCGGAAC GACGCTGGTG
CTGGTGACCC ATAGCGCCGA GGTCGCGGCC CTGGCCGACC GGGTGCTCAC CATCGAGAAC
GGGCTTCTGG TCGAGGCCGG GCGCCGCTCT GGTGGTAAAC CATGA
 
Protein sequence
MADPIIELTG ICKSFQEGER ERVVFRNASL AVETGEWLFL LGRSGSGKST LLNLLSGIDL 
PDSGEVRVAG QPLNRQSERE RTLFRRSSIG FVFQFYNLIP TLTVLENVLL PLELAGLLNP
EHDKLARDLL EQVGLADRAA SFPDRLSGGE QQRVAVARAL VHRPKLVLAD EPTGNLDAET
GRQVLDLFQR LLRESGTTLV LVTHSAEVAA LADRVLTIEN GLLVEAGRRS GGKP