Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_2210 |
Symbol | |
ID | 6782206 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | - |
Start bp | 2572050 |
End bp | 2572754 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642768206 |
Product | ABC transporter related protein |
Protein accession | YP_002139018 |
Protein GI | 197118591 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00255017 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCCGATC CGATCATCGA GCTGACCGGG ATATGCAAAT CGTTCCAGGA GGGGGAGCGG GAGCGGGTGG TTTTCCGTAA CGCCTCTCTT GCCGTGGAAA CGGGCGAGTG GCTCTTTTTG TTAGGGCGCA GCGGCTCGGG TAAATCAACC CTGCTCAACC TGTTAAGCGG CATCGACCTT CCCGATTCGG GCGAAGTGCG GGTGGCGGGT CAGCCCCTGA ACCGCCAGAG CGAACGCGAG CGGACCCTGT TCCGGCGCAG CAGCATCGGC TTCGTCTTCC AGTTCTACAA TCTCATCCCC ACCTTGACCG TCCTGGAAAA CGTCCTGCTC CCCCTGGAGC TGGCCGGCCT CCTCAACCCA GAACACGATA AATTGGCGCG CGACCTGCTG GAGCAGGTGG GACTCGCGGA CCGCGCGGCG AGCTTTCCGG ACCGGCTGTC CGGCGGCGAG CAGCAGCGCG TTGCCGTGGC ACGCGCCCTG GTGCACCGGC CCAAGCTGGT GCTGGCCGAC GAGCCCACCG GCAATCTCGA CGCCGAGACG GGGCGGCAGG TGCTCGACCT TTTCCAGCGC CTGTTAAGGG AGAGCGGAAC GACGCTGGTG CTGGTGACCC ATAGCGCCGA GGTCGCGGCC CTGGCCGACC GGGTGCTCAC CATCGAGAAC GGGCTTCTGG TCGAGGCCGG GCGCCGCTCT GGTGGTAAAC CATGA
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Protein sequence | MADPIIELTG ICKSFQEGER ERVVFRNASL AVETGEWLFL LGRSGSGKST LLNLLSGIDL PDSGEVRVAG QPLNRQSERE RTLFRRSSIG FVFQFYNLIP TLTVLENVLL PLELAGLLNP EHDKLARDLL EQVGLADRAA SFPDRLSGGE QQRVAVARAL VHRPKLVLAD EPTGNLDAET GRQVLDLFQR LLRESGTTLV LVTHSAEVAA LADRVLTIEN GLLVEAGRRS GGKP
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