Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_2202 |
Symbol | |
ID | 6782196 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | - |
Start bp | 2561888 |
End bp | 2562613 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642768196 |
Product | ABC transporter related protein |
Protein accession | YP_002139010 |
Protein GI | 197118583 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.87291 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGAAG TGGTTCGCCT CATCGACGTC GCCAAGGTTT ACACCATGGG CGAGGAGCGC GTCGAGGCCA TGAAGGGAGT CTCTTTCGCC GTCAGCCGCG GCGAGTTCGT CTCCATCATG GGCGCCTCGG GGAGCGGCAA ATCGACCTGC ATGAACGTCC TGGGTTGCCT GGACGTCCCC ACCCGCGGTC AGTACCTCCT GGACGGCATG GACGTGGGGA AGCTCTCCCC CGACGCGCTA GCCGAGGTGC GCAACAAGAA GCTTGGCTTC GTATTCCAGG GGTTCAACCT GCTGGCCCGG ACCACGGCGC GTGAGAACGT CGAGCTGCCG CTGGTCTATT CGCATATCCC TGCGGCGGAA CGCCGCTCCC GCGCCCACGA GGCGCTGGAG CGGGTGGGGC TTGCCGGGCG CGAGGGGCAC TACTCGAACC AGCTTTCCGG CGGGCAGCAG CAACGTGTCG CCATAGCGAG AGCCCTGGTC AACAGTCCCT CCATCATACT CGCCGACGAA CCGACGGGGA ACCTGGATTC CAGGACCACC GTGGAGATCA TGTCCATTTT CCAGGAACTG AACCGGCAGG GGATCACCAT CATCATGGTT ACCCACGAAC CGGACGTGGC CGAATTCACC GGGAGGCACA TCATCTTTCG CGACGGCCTG ATCGTTTCCG ACACCCCTCA TGCCGCGAAG AGCGCGACCG TACCGGGGGA GGTGGCCAGG CCATGA
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Protein sequence | MNEVVRLIDV AKVYTMGEER VEAMKGVSFA VSRGEFVSIM GASGSGKSTC MNVLGCLDVP TRGQYLLDGM DVGKLSPDAL AEVRNKKLGF VFQGFNLLAR TTARENVELP LVYSHIPAAE RRSRAHEALE RVGLAGREGH YSNQLSGGQQ QRVAIARALV NSPSIILADE PTGNLDSRTT VEIMSIFQEL NRQGITIIMV THEPDVAEFT GRHIIFRDGL IVSDTPHAAK SATVPGEVAR P
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