Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_2188 |
Symbol | |
ID | 6782182 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | - |
Start bp | 2547717 |
End bp | 2548601 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642768182 |
Product | inner-membrane translocator |
Protein accession | YP_002138996 |
Protein GI | 197118569 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGCTTT TAAATCAGGT ATCGCAATTC GTCATATCGG GGCTCGCCAC CGGCGCCATC TACGCCCTGA TTGGCCTCAG CTTCGCGATC ATATTCAACT CCACCGGTAT CATCAACTTC GCCCAGGGTG AGTTCGTCAT GCTGGGCGGA GTGCTTACCA TATTCTGCAT CAACGCGCTG CAACTCCCGC TTCTGGCTGC GATCTGCGCC GCCGTGGCGG GGACCACCGT CATCGGGCTT GTTTTTGAGC GGCTTGCCAT CAGGCCGCTC AAAAACGCCA CCCCGCTCGC GCTCATCATC ATCACCATCG GCGCCAGCAT CCTGATCCGC GGCGTGGTGA TGCTCCTTTG GGGCAAGGAC ACCAAGGCGC TCCCGGCGTT TTCGGGGAAC GATCCCATCT CCGTTGCGGG GGCGACCTTA CTGCCGCAGC ATCTCTGGAT CTTCGGCGTC ACCATCCTCG TCATCGTGGG CTGCCGGCTC TTCTTCCACC ACACCATCAG CGGCAAAGCG ATGCGCGCCT GCTCCTTCAA CCCGCGCGCC GCGAACCTGG TCGGCGTCAG CGTCGGCAGG ATGGTGCTTT TCTCCTTCGT CATCAGCGCG GCCGTGGGCT CTTTGGCAGG CGTCATCATC GCGCCGCTCA CCATGACCGC TTACGACGTC GGCGTCATGC TGGGCTTGAA GGGGTTTTGC GCCGCCATCA TGGGGGGCAT GGGAAGCGGC CTGGGGACCG TTTTAGGTGG GCTCATCCTG GGGGCGCTGG AATCTTTGGG TGCCGGGCTC ATCTCCTCCG GCTACAAGGA CGCCATCGCC TTCTGCATCC TGCTCCTCAT CCTTTTCATC CGTCCTCAGG GGCTCTTCAA AAAGGGTGAA ACCGAGAGGG TGTAA
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Protein sequence | MELLNQVSQF VISGLATGAI YALIGLSFAI IFNSTGIINF AQGEFVMLGG VLTIFCINAL QLPLLAAICA AVAGTTVIGL VFERLAIRPL KNATPLALII ITIGASILIR GVVMLLWGKD TKALPAFSGN DPISVAGATL LPQHLWIFGV TILVIVGCRL FFHHTISGKA MRACSFNPRA ANLVGVSVGR MVLFSFVISA AVGSLAGVII APLTMTAYDV GVMLGLKGFC AAIMGGMGSG LGTVLGGLIL GALESLGAGL ISSGYKDAIA FCILLLILFI RPQGLFKKGE TERV
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