| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2153 |
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| Symbol | |
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| ID | 6782147 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 2505098 |
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| End bp | 2507035 |
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| Gene Length | 1938 bp |
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| Protein Length | 645 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642768147 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_002138961 |
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| Protein GI | 197118534 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCGGG GTGACGGCGC GGCCATGCCC ATGGACGCAG ACAAATTGGC AGCAATGGTG
GAATCGTCTG GCGACGCGAT TGTCGGAATG AACTTGGACG GTACCATCAG CAGCTGGAAC
CCCGCTGCGA CCAGGCTCTA TGGGTATTCC GCAAAGGAAG CTGTAGGCTG CGATATTTCC
GTACTGGAAT CTTTGGAGCG CCCCGGCGAG ATCGCGGCGG AGCTGCAAGA GGTGCAAAAG
GAGAAGCGAT CCCGGCACTA TGACCGCTAC CGCCGGCGCA AAGACGGCAG CCAGGTTTTC
GTCTCACTGA CGCTCTCCCC GATACTGGAC AGGCAAAATA CGCTGATCGG CCTGTCCTCC
ATCGGCCGCG ATGCGGAGGA ACTGGTACAG AAACGTACCA AGGAACTGAT GCAGGCCATC
CGGGCACTGC AAGTTGAGAT CTCCGAGCGG AGCAGGGCAG AGGAGGCGCT TACCCAGAGC
GAGGAGATGC TCCGCTTCGC GGCATTGGCG GCGGATATCG GCATATGGCA CTACGATCTG
CTGACAGGGG ACCTGGTCTG GAGCGACAGG TGCAAGGAGT TGTTCGGCTA TCCTCACGAC
TTTCAGATGA CCTACGAAGC TTTCCTCGAC GCCGTAGCGG AGGAGGACCG GCAGAGGGTA
GACCAAGCGG TTCAGAGGGC TTTGCAGGAC AAGTCCGAAT ATGCAGTAGA GCTGAGGGTG
ATATTGCAAG ACGGACAGGT GCGGTGGGTG ATGAGCAAAG GGCACGCCTT CTACGATAGC
CAGGGGAAAC CGCTGCGGAT GGCAGGCATA GCCTTGGACA TCACCCAGAC GAAAAAAACG
GAAGCGGCGT TATTGCGAGC GAAGGAGGAA TGGGAAAGCA CTTTCAACAG CGTCCCCGAT
CTCATCGCCA TACTAGACGA AAAGTGCCGC ATCGTCCGGG TCAACGAGGC CATGGCGCAG
CGGGTCCATA TCAGCGCCGA CGGGTGTGTC GGGCTTTTTT GCTACCAGGT TCTTCACGGG
GAGAATGCGC CGCCTCATTT CTGCCCCCAC GGCCAGAGCT TGATGGACAA TATGCAGCAC
ATTGTCGAGG TCTACGATCC CCACCTGTCC GGGACCTTTC TGGTCAGCAC CACGCCCCTT
GTTGCGGCGG ACGGCAAATC TATCGGAACG GTTCATGTTG CCAGGGACAT AACGGAGCGC
AAGAGGGCGG AAGAGGAGAT CGCCCGGCTG AACGCCGACC TGGGGGCGCA CCTAGCCGAA
CTGGAGGAGA GAAACCAGGA ACTGGATGCC TTCAACCGGA TGATATCCCA CGACCTGCGG
CAGCCCTTGA ACATCATGTC CCTTGCCGGC CAGCACATCG AGATGCTATG CAGCAGCGAC
ACCCCCGAGT GCCGGCAAAG CGTGCAGACC CTCGAACAGT CGGTATTGCG CATGAACACA
ATGATCGAGA CGCTGCTTTC CTTCTCGCGT TCGACCCATG GGAATTTGAT GCGAGAGGAT
TTCGACATCA GCGAGATGGT ACAGGTGATA CTCGCGGAAT TTTATCTGGC CGAGCCGCCG
CGCAGGATAA CCACAGTGAT AGCGGAAGAG ACAAAGGTCA ATGCCGACCC CCGGCTGTTG
AGGACTGCGC TGGAAAACCT CCTGGGCAAC GCCTGGAAAT ATACCGGTGG CCGTGAAGAG
GGATACATCG AGTTCGGTGT GAGGGGAGGG GGGGCAAAAC CGGTCTACTT CATCAAGGAC
AACGGGATGG GGTTCGACAT GGCCGATGCG GATAAGCTCT TCGTCCCCTT CCAGCGGCTG
GCCGGGGCCG ATGCGTTCAA AGGTTCGGGC ATCGGCCTTG CGACCGTGGA AAAGATCATC
AAGCGGCACG GCGGAAGAAT CTGGGCAGAG GGCGAGCCGG ACAAGGGAGC CACCTTCTAC
TTCACGCTGG AAAGTTGA
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| Protein sequence | MKRGDGAAMP MDADKLAAMV ESSGDAIVGM NLDGTISSWN PAATRLYGYS AKEAVGCDIS
VLESLERPGE IAAELQEVQK EKRSRHYDRY RRRKDGSQVF VSLTLSPILD RQNTLIGLSS
IGRDAEELVQ KRTKELMQAI RALQVEISER SRAEEALTQS EEMLRFAALA ADIGIWHYDL
LTGDLVWSDR CKELFGYPHD FQMTYEAFLD AVAEEDRQRV DQAVQRALQD KSEYAVELRV
ILQDGQVRWV MSKGHAFYDS QGKPLRMAGI ALDITQTKKT EAALLRAKEE WESTFNSVPD
LIAILDEKCR IVRVNEAMAQ RVHISADGCV GLFCYQVLHG ENAPPHFCPH GQSLMDNMQH
IVEVYDPHLS GTFLVSTTPL VAADGKSIGT VHVARDITER KRAEEEIARL NADLGAHLAE
LEERNQELDA FNRMISHDLR QPLNIMSLAG QHIEMLCSSD TPECRQSVQT LEQSVLRMNT
MIETLLSFSR STHGNLMRED FDISEMVQVI LAEFYLAEPP RRITTVIAEE TKVNADPRLL
RTALENLLGN AWKYTGGREE GYIEFGVRGG GAKPVYFIKD NGMGFDMADA DKLFVPFQRL
AGADAFKGSG IGLATVEKII KRHGGRIWAE GEPDKGATFY FTLES
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