| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2106 |
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| Symbol | |
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| ID | 6782100 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 2443629 |
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| End bp | 2445293 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642768101 |
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| Product | PfaD family protein |
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| Protein accession | YP_002138915 |
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| Protein GI | 197118488 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
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| TIGRFAM ID | [TIGR02814] PfaD family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGATCCAT TTTCACTACA GGGTGACCAT ACCGCTCGCT CTGCAAACCT GGAAAACCTG
GGTTCGTGGC ACCCCGCCTC GAACGCCCCC CCTCAAAAGG CCGCCAACCT GAGAGACGCC
CTCCGCTACG TACGCCAGCC GCTGTATCTC GTGGAAAAGG AAAGGACCAT GGTCCCGAGG
CTGGGAGGGA TCGGCCGGCT CGGCGCCGTC AACCCGGGCG CGCTGCCTAT CGCCGCTTAC
GCCCCTCCCT GCTTTCCGGA AAACCTGGGG GATCCTTCTT TTTGCCGCGA ACTTGGCATC
CGCTACCCCT ACGTCGGCGG TTCCATGGCC AAGGGGATCA GTTCCGCGGC CATGGCCGAG
GAGTTGGGCC GCGCCGGGAT GCTCGGCTTC TTCGGCGCCG CCGGCCTTCC GCTTGCCACC
GTCTCCGAGA CCGCCGACCG CCTCAAGGCC TCCCTCGGCG ATATCCCCTA CGGTTTCAAC
CTGATCCACT CCCCGCACGA GCCCGAGTTG GAGCGCGAGC TCGCCGAGCT GTACATAAAG
AAGGGGATCC GCACAATCGA GGCCTCGGCC TTCCTGGCCC TGACGCTACC CTTGGTCAGG
TACCGGCTGC ACGGCATCAA GCGCGCCGCC GACGGGTCCA TCGTCACCCC CAACCGCATC
ATCGCCAAGG TCTCCCGCGA GGAACTGGCG GCGAAGTTCT TCGCACCGGC TCCCGAGAAG
CTCCTGCGCG CGCTGGTCGC CAACGGCTCC ATCACCGCCG AGCAGGCCGA ACTGGCCGCG
CTGGTACCGC TGGCGCAGGA CGTGACGGCC GAGGCTGATT CCGGCGGCCA TACCGACAAC
CGCCCCGCCC TCGCCCTCTT CCCGACCATC AACGCGCTGG CGGCGAAGCT GCAGCGGCAG
TACGGCTACA GCTGCCGCCT GCGGGTGGGG CTTGGCGGCG GAGTCTCGAC GCCGGCCTCA
GCGGCAGCCG CCTTCTCCAT GGGCGCCGCC TACCTCGTGA CCGGGTCGGT GAATCAGGCC
TGCGTCGAGT CCGGCACCTC CGACACCGTG CGCGGCATGC TCGCCGGCAC CCGCCAGGCT
GACGTGACCA TGGCCCCCGC CGCCGACATG TTCGAGATGG GGGTCACCGT GCAGGTCCTA
AAGCGCGGCA CCATGTTCCC CATGCGCGCA CAGAAGCTCT ACGAGATCTA CCGCGCCTGC
AGCAGCCTCG ACGACATCCC CGCCGCCGAG CGCGAGAAGC TGGAGAAGAC CATGTTCCAG
GCGTCGCTCG CCGACATCTG GCACGACACC CGCGCCTTCT TCGCCAAGCG CGACCCCTCC
CAGGTCGAGC GTGCCGAGCG CGACCCGAAG CACCTGATGG CGTTGGTCTT CCGCTGGTAT
CTCGGCATGG CCGCGCACTG GGCCAAAGAC GGAGCGGAAG AGCGGCGCAT GGACTACCAG
GTCTGGTGCG GCCCCGCCAT GGGAGCCTTC AACGAATGGG CCTCAGGTTC CTTCCTCGAC
GCCCCGGGCA ATCGCACGGT CGAAGCCGTG GCCCTAAACA TCCTGCACGG AGCGGCCGCA
CTTAACCGCG CCAACTTCCT GAGCAGCCAG GGCATCGAAC TCAGGATGGA TGAAATCGCA
CCGCAACCTC TCGAAATCGC ACAAATCAAG GAGTACCTTT GTTGA
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| Protein sequence | MDPFSLQGDH TARSANLENL GSWHPASNAP PQKAANLRDA LRYVRQPLYL VEKERTMVPR
LGGIGRLGAV NPGALPIAAY APPCFPENLG DPSFCRELGI RYPYVGGSMA KGISSAAMAE
ELGRAGMLGF FGAAGLPLAT VSETADRLKA SLGDIPYGFN LIHSPHEPEL ERELAELYIK
KGIRTIEASA FLALTLPLVR YRLHGIKRAA DGSIVTPNRI IAKVSREELA AKFFAPAPEK
LLRALVANGS ITAEQAELAA LVPLAQDVTA EADSGGHTDN RPALALFPTI NALAAKLQRQ
YGYSCRLRVG LGGGVSTPAS AAAAFSMGAA YLVTGSVNQA CVESGTSDTV RGMLAGTRQA
DVTMAPAADM FEMGVTVQVL KRGTMFPMRA QKLYEIYRAC SSLDDIPAAE REKLEKTMFQ
ASLADIWHDT RAFFAKRDPS QVERAERDPK HLMALVFRWY LGMAAHWAKD GAEERRMDYQ
VWCGPAMGAF NEWASGSFLD APGNRTVEAV ALNILHGAAA LNRANFLSSQ GIELRMDEIA
PQPLEIAQIK EYLC
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