| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2104 |
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| Symbol | |
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| ID | 6782098 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 2429006 |
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| End bp | 2436196 |
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| Gene Length | 7191 bp |
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| Protein Length | 2396 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642768099 |
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| Product | Beta-ketoacyl synthase |
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| Protein accession | YP_002138913 |
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| Protein GI | 197118486 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases
[COG3321] Polyketide synthase modules and related proteins |
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| TIGRFAM ID | [TIGR02816] PfaB family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCAGC AGTCGCCTTC CGTGGCAATC GTCGGCATCG GCGGGATCTT TCCCGACGCG
CCGGAACTGA CAACTTTCTG GAATAACATC CGCAACGCTA AAAGCGCCGC CCGCGAGGTC
CCGGCCGGGC GCTGGCAGCT CCCGGCCGAT ACCGCCTTCC ACCCGGAGGC GGGAAAGCCG
GACCACGTCT ACTCCAAGCG CGGCTGCTTC ATCGACTCCA TACCTCCCCT GGCGAGCCTT
TCGGGGCTCA ACATCGACCC GGAGCTTGCC TCGGGGCTCG ATCCCCTGTT CCACCTGCTG
CTGCACGCCG GCAAAAGGGC CTTCGACTCC GCCGTCACCA CCGGGGTCGA CCGCTCCCGT
ATCGGCGTCA TCATCGGCAA CCTGGCGCTT CCCAGCGAGA AATCCGCCGA GCTCTCCCGC
GCCCTTTTGG GACGGAACTT CGAGGAGAAA CTCCTCGGGC ACGCGGGGGA CGCACCGATC
CCGCAGGGGC TGAACCGCTA CGTGGCCGGT CTCCCTGCGG GCCTTCTTTC CGCGGCTCTC
GGCCTGGGTG GCGGCTGCTG CACCCTCGAC GCAGCCTGCG CCTCCTCCAT CTACGCCATC
AAGCTTGCCT GCGACGAGCT TCTCTCCGGT CGCGCCGACG CCATGCTCAC CGGCGGGCTC
TCCCGTCCCG ACCCGCTCTA CACCCAGATG GGCTTCTCCC AACTGCGCGC GCTGTCGCGC
CGCGGCATAT GCTCCCCGTT TGATGCGAGC GGCGACGGCC TGGTCGTGGG CGAAGGCGCG
GGTATCTTCG TGCTGAAAAG GCTCGAGGAC GCCGTGGCGC AGGGAGACAA GATCTACGGC
GTAATCAAGG GAATAGGTCT TTCCAACGAC GTGGGTGGGA GCCTCCTGGC CCCCCTTTCC
GACGGGCAGC TGCGCGCCAT GCGCGCCGCC TACGCCAAAG CGGGATGGGA ACCGCAGGAC
GTCGACCTGA TCGAGTGCCA CGCAACAGGC ACCCCGGTAG GTGACGCCAC CGAAGTCGCG
AGCCTCAGGG AGCTTTGGGG CGAGACGCCA GAAGCGCGTA AAGGGTGCGT CATCGGGTCG
GTCAAGTCGA ACATCGGCCA CCTTCTGACC GCGGCTGGTT CGGCAGCACT CACCAAAGTG
CTCCTGTCCA TGGCGGAGGA GACGCTTCCC CCCACCGCCA ACTTCAACGC CGCGCCGGCC
AACTTCCAGC TGGAACAAAG CCCCTTCCGG GTGCTGCAGA GCGCCGCTCC CTGGAAAAGG
CGCGGAGACT CCGTCCCGCG CCGCGCCGCC GTCTCCGCCT TCGGCTTCGG CGGCATCAAC
GGCCACCTGC TGGTCGAGGA GTGGCTCCCT GAGAGCGAGG CTACCGCCTC CCCCGCCCCG
GCAAAAGGTT GCCCCATAGC CGTCGTGGGC CTGGACGCCC GTTTCGGAGA GTGGCAGGAC
CTCACCTCCT TCCAGGCACG CGTCTTGGGC GGAGGTACAC CGGCCCGCCC GACCCAGCCC
AAGGACTGGT GGGGAGCCGA GAAGAGCGCC TGGTTCGCCA AGGAGAAACT GAAGGAGACC
CCCTTCGCCG GCTTCTATCT GGACCAGTTC GACCAGAGCC CTGGGCAGTT CCGCATTCCG
CCCAAGGAGC TGGAAGAGAT GCTCCCACAG CAGCTCCTCA TGCTGCAGTC GGCCGCCGCG
GCCATCGCCG ACGCGGGTAT GGACAAGAAG GAGAACCTGC GCGCCGGCGT CTTCATCGGC
ATCGCCCTCG ACCTGAACAG CACCAACTTC GCCTTCCGCT GGTCCATAGC CGAAAAGGCG
CGGCAGTGGG AGAAGGAGCT GGGCCTCAAC CTGAGCGAAC AGGAATTCGA GCAGTGGGTC
GCGCAGCTGC GTGAAGCGGC CGGCCCGGCA CTGAGCGCCA ACCGGACCAT GGGTGCTTTG
GGAAGCGTCG TGGCGAGCCG CGTCGCCCGC GAGTTCCGCT GCGGCGGCCC CAGCTTCACC
CTCTCCAGCG AGGAAAGCTC CGGCCTGCGC GCCCTGGAGA CCGCGGTGCG CCAACTCCAA
AGCGAGGAGA TCGACCGCGC TGTAGTAGGC GCCGTCGACC TTGCCGGCGA CCTGAGGGCG
GCAATCGGCC AGCACCTGGG ACGCCCCTAC TCCCGCTTCG GCAGCGCAAC CCCATTCGAC
CAGTCCGCAG ACGGCGCCAT CGTCGGGGAA GGCGCGGCCA GCGTGATCCT CAAACGTCTG
GAAGACGCGG AGCGCGACGG GGACAGGATC TACGCCGTGA TCGGCGGCCT GGGTACCGCC
AGCGGCGATC TGATGCTACC AGGCACAGCC GCTTACCGGC ACGCTCTGGA GCGCGCCTAT
GGCGAGGCCG GCATCACACC GGACAAGGTC GGCTACCTCG AAGCCCATGG CAGCGGGCAC
GCCGCCGAGG ACCGCATGGA AGCGGCAGCC CTTGCCGAGT TCTTCGACGA CCCCGCACAC
GCCGCAGCCT CACAAAGGCG CTTGGCCGTC GCCAGCGTCA AGGCGGACAT AGGGCACACC
GGCGCCGCCA GCGGCCTAGC CTCGCTGGTC CGCGGCTGCC TTGCGCTTTA CCAGGAGATC
ATCCCCGGGG CCCGCTCCGG CGAGCGGCCG CTCGGAAAGG TCTCCGGAAG CGGTTCGCTC
TTCCTGCCGG AGGCCTCGCG CTTCTGGCTC AGGAACCGCT GCGAGGGGCC GCGCCACGCC
GGCGTCAGCG TCTTCGGTGT GGACGGCAGT TGCAGCCACG TGGTGCTTCT GGGGTACGAC
AAGGAGCAGC CGAAAGCTGC GGCCGAGAAG GTCGCGCCGT TGGGCGGGTG GGAGGAGTAT
CTCTTCTGCG TCGCCGGCGC CGACCGAGAG CAGTTGGCCG AGCGCCTGCA GCAGTTGAAG
CAGCAGGCGG AGAAAAAGCC GGCGCCGTCC CTCTCCGCGC TATCGCACGA CCTGCTCAGC
CAGAGGAGCC TGGCCGGCGA GCCGCTGGCG ATAGCCCTGG TAGCGCGCAG CCTCGAAGAG
CTTTCATCCC TTTGCCTGCA GGGGGAGCGG ATGGTGCAGT CCGACCCGGC CTACGCCGAT
GCGGTGCTTC ACCCGTCGCT TCGCGACCGC ATCTTCTTCA GCGCCGAGCC CATAGGGAAA
TCGGGCAAGA TCGGCTTCGT CTATCCAGGT TCCGGCAACC ACTTCGCCGG GATGGGGATG
GAGTTGTCCG CCCGCTGGCC GCAGGTCTAC CGCCGCCAGG ACGGCGAGAA CCTCTACCTG
CGCGACCAGT TCCAGCCGGA GCAGTTCTGG AACGGCGCCC CCATGGAGAG CGTCAACGAG
AACCACCTGG CGGTCATCTT CGGCCAGGTC GCTACCGGCT GCGCCGTGAC CGACGTGGTG
CGGCAATTCG GCATCGACCC CAGCGCCGTG ATCGGCTACA GCCTGGGAGA ATCCGCGGGC
CTCTTCGGCA GCCGCACCTG GATCGAGCGC GACCTCATGC TGTCGCGCAT GAAGGCCTCC
ACCCTCTTCA CCCGCGACCT GGCCGGCGAA TGCCGCGCCG CCCGGGAGGC TTGGGGGGAA
ACCGAGGGGA AGGAAATCCA CTGGAGCATC GGCGTGGTCG ACGCCCCGGC CCGCGAGGTG
CGGCGCGCGC TGAAGAAAAC CTCGCGCGTC TACCTCCTCA TTGTCAACAC CCCCGATGAA
TGCGTCATCG GCGGCGACGT GAAGTGGGTG AAGCATCTGG TCGCCATGCT GGACTGCCGC
TTCTTCCCGC TGCAGGGTGT CACCACGGTG CACTGCGAGG TGGCGCGCCA GGTGGCCAAC
CCTTACCGTG ACCTGCACAA CTTCAACACC ACCCCTCCTG CTGGGGTTAC CTTCTACAGC
GGCGCCGCCG GCGCGGCGTA CCAGGTTCAC CGGCGCTCCG CAGCCGACTC GATCCTCTCC
CAGGCCATCG AGGGGATCGA TTACCCCAAG GTGATCGAGG CGGCCTACGC CGAAGGGGTA
AGGTACTTCA TCGAGATGGG ACCGGGCGGC TCCTGCAGCC GCATGATCGG CCGCATCCTC
GCCGGACGCC CCCACATGGC GCGTTCCGTC TGCCTCCCCG GGGTGGACGC CAATTCGGCC
CTGCTGCGGC TTTTGGCCCA GCTCACCTCC GAGCGCGTTC CCGTCGACTT CGAACCGTTG
TTCGCCCTCG CACCGGCGCG TGTCAGCGCC ACGGCCTTAG TCGGCGAGGG GAAATCCCTT
CGCTTCACTA CCGGCGGCGA CCCCTTTGCA CCGTCGCGCC CGGGAATGGA AGCTTCCGCA
CCGGCACAGG CGGCACCGCC TGTCAGGCCG CAGGCGCCCG TTTCCGCCGC ACCTGCCGCA
ACCAAGGTAG CCGTACCGCA GCCCCCCCAG ATAAGGCGGT CCACAGATGC GCCGGTAAGT
ACGTTGTCGA TTCCGGCTGC AGATCAAGTG GTTGCACCGA CAGCACCATC GACACACAAT
GCCGCAACTC AGGCGCAGCC TCAGGCGGCT CAGCCCCAGA TGGGGCAGCC GCAAGTGAAC
CCCGCGCCAC TACAGGCCGT TTCGCCGCTC CCCATCCAGG GTGCGATCCA GGAACCGCTG
CTGCGCGAAT TCGCCGCCGC CCAGGAAGCA TCCCAGCAGG CCCATGAGGC TTACCTGCGC
GTCGCCACCG ACCTGAGCCG TTCCATCGCC GAGACGCTGG CGCTGCAGAT ATCCCTGCAG
CAGCAGATGC TGGCCGCGGG GATGCCACTG GATGCGGCAT CTGCTTTCCC GGCAACGGGT
AATTATCCGG GATGGTCTCC GGAACCGGCT GCGGCAGTAC CCGCAGCCCC CCCGGTGACA
GTGCGGCCTG CCCCCTACCC CGGCGCCCTT CCCGCGCTCT ACGACGAGCA GATGTGCTTC
GAGTTCGCCG TGGGCTCCGT CGCCAAGATG CTCGGGCCCG AGTTCGCCGA GGCGGACAGC
TTCCCGACCC GCGTCCGGCT CCCCGACACG CCGCTGCAAC TGGTGCACCG CATCGTGGCG
CTGGAGGGTG AGCCCAAATC CATGACCAGC GGCCGCGTGG TGACCCAGCA CGACGTGCAT
CCGGGCGCCT GGTACCTGGA TGGTGGCCGC ATCCCGACCT GCATCGCAGT CGAGGCCGGT
CAGGCGGACC TCTTTCTTTC CGGCTACCTG GGGATCGACT TCATCACCAA GGGACTGGCG
GTATATCGCC TGCTGGACGC CGTGGTCACC TTCCACCGCG AGCTCCCGGG GCCGGGCGAA
ACCATCAACT ACGACATCCG CATCGAGCGC TTCTTCCGCC AGGGCGAGAC CTACCTGTTC
CGTTTCCACT TCGAGGCGAC GGTGAACGGG GAGCCGCTTC TATCCATGCG CAACGGCTGC
GCCGGGTTCT TCACCCAGGG CGAACTGGAC GCCGGCAAGG GGATCGTGCG GGGCGCCATC
GACCTCCGCC CCAAGACAGG CAAGCTCCCG CCGGACTGGA AGTACCTGGT GCCGATGCAG
CCAGCAGCCT ACAGCGCGGA TCAGTTGAAC GCGCTACGCA GGGGGGATCT CGCGGCCTGC
TTCGGCCCCC TCTTCGCAGG ACTTCGCGTA GGCAGACCAC TAACCATACC GGGCGGCAGG
ATGGAACTCG TGCACCGCGT CATGGAACTG GTGCCCGACG GCGGTCGCTG CGGCCTGGGC
TTCATCCGCG CCGAGGCCGA CATCCACCCG GACGACTGGT TCATCACCTG CCACTTCGTC
GACGACCGCG TCATGCCCGG CACCCTCATG TACGAGTGCT GCATGCACAC GCTGCGCATC
TTCCTGCTGC GCCTGGGATG GGTCGCCGAG TCTGACGGCG CCGCGTGGCA ACCCGTTCCC
GGCGTCGCCA GCCAGCTTTG CTGCCGCGGT CAGGTGCTGG AGACAACCAA GGTGGTCACC
TACGAGGTCA CGGTGCGCGA GCTCGGTTAC CGCCCCGAGC CCTACGCCAT CGTGGACGCT
CTGATGTACG CCGACGGCAA GCCGATCGTC GAGATCACCA ACATGTCCGC CCAGCTGACC
GGAACCAACC ATCAAGCGCT GCTTGAACTT TGGGGTGCCA AGGGCCAGGA ACTGCTTAGC
ATAATAGCTG CTGTGCCGGC CCAGTCAGCC GCCGGCTACG ACGTGAAACC TGCCGTCTAC
ACCAAGGCGC AGATCCTCGC TTACAGTAAC GGCAAGCCGT CCGAAGGGTT CGGCGACAGG
TACCGGATCT TCGACAGCGG GAGAAAGATC GCCCGGCTCC CCGGACCTCC CTTCCAGTTC
ATGGACCGGG TCACCGCGGT GCGTGGCGAG CCCTGGCAGA TGGTCCCCGG AGCGATGGCC
GAAGCGCAGT ACGACATCCC GGTGGACGAG TGGTATTTCG CCGCCGACCG CCAGGCGCGC
ATGCCCTTCT CCGTGCTGCT TGAAGCGGCA CTGCAGCCCT GCGGCTGGCT CGCAGCCTAC
GTGGGCTCCG CGCTCACCAC CCCCAACGAC ATCTCCTTCA GGAACCTGGG AGGAACGGCG
GTGCAGCACC GGGCCGTGAC GCCTGAGACC GGCACGCTCA CCGCGACCGC CACCCTCACC
AAGGCGGCGA CCAGCGGCGG GATGATCATC CAGGAGTTCA GCTTCAGCGT AGCCGACCGC
CAGGGCGTCC TCTATGAGGG GGACACCATG TTCGGCTTCT TCGCCAAAGA GGCGCTGGCG
AACCAAGTCG GCATCAGGGA AGCGGCCCCG CACCAGCCGA CGGCGGAAGA GGTCGCGCGA
GGAAAGAAGC TCCTCTATCC CGAGAGCCGC CCATACCCAG AGAAGAAGCT GAGGATGATC
GACCAGATCG AACTCTACGT CGCCGACGGC GGCCCGGCCG GTCTCGGTTA CCTGAAAGGG
ACCAAACTGG TTGACCCGAA CGACTGGTAC TTCAAAGCGC ACTTCTACGA AGACCCGGTG
ACGCCGGGGT CGCTGGGGCT TGAGTCGTTC CTGCAACTGG TAAAGTTTGC GGCGGTCGAG
CGTTGGGGCT GGCAGGAGGG TGACACTCTT GCGGCTGTGG CGCTGGAGCG GGAGCACCGC
TGGCTCTACC GCGGCCAAGT GGTGCCGACC AATAAGGAAG TCACCGTAGT TGCCTGGATC
ACCGCCGTCG ATGACGCCAA CAAGGTACTT ACTGCCGCCG GGTTCCTGTA TGTGGACGGG
CGTGCCATTT ACCAGATGAA CGACTTCACG CTGCAGTTGG AGCGGGGGTA G
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| Protein sequence | MKQQSPSVAI VGIGGIFPDA PELTTFWNNI RNAKSAAREV PAGRWQLPAD TAFHPEAGKP
DHVYSKRGCF IDSIPPLASL SGLNIDPELA SGLDPLFHLL LHAGKRAFDS AVTTGVDRSR
IGVIIGNLAL PSEKSAELSR ALLGRNFEEK LLGHAGDAPI PQGLNRYVAG LPAGLLSAAL
GLGGGCCTLD AACASSIYAI KLACDELLSG RADAMLTGGL SRPDPLYTQM GFSQLRALSR
RGICSPFDAS GDGLVVGEGA GIFVLKRLED AVAQGDKIYG VIKGIGLSND VGGSLLAPLS
DGQLRAMRAA YAKAGWEPQD VDLIECHATG TPVGDATEVA SLRELWGETP EARKGCVIGS
VKSNIGHLLT AAGSAALTKV LLSMAEETLP PTANFNAAPA NFQLEQSPFR VLQSAAPWKR
RGDSVPRRAA VSAFGFGGIN GHLLVEEWLP ESEATASPAP AKGCPIAVVG LDARFGEWQD
LTSFQARVLG GGTPARPTQP KDWWGAEKSA WFAKEKLKET PFAGFYLDQF DQSPGQFRIP
PKELEEMLPQ QLLMLQSAAA AIADAGMDKK ENLRAGVFIG IALDLNSTNF AFRWSIAEKA
RQWEKELGLN LSEQEFEQWV AQLREAAGPA LSANRTMGAL GSVVASRVAR EFRCGGPSFT
LSSEESSGLR ALETAVRQLQ SEEIDRAVVG AVDLAGDLRA AIGQHLGRPY SRFGSATPFD
QSADGAIVGE GAASVILKRL EDAERDGDRI YAVIGGLGTA SGDLMLPGTA AYRHALERAY
GEAGITPDKV GYLEAHGSGH AAEDRMEAAA LAEFFDDPAH AAASQRRLAV ASVKADIGHT
GAASGLASLV RGCLALYQEI IPGARSGERP LGKVSGSGSL FLPEASRFWL RNRCEGPRHA
GVSVFGVDGS CSHVVLLGYD KEQPKAAAEK VAPLGGWEEY LFCVAGADRE QLAERLQQLK
QQAEKKPAPS LSALSHDLLS QRSLAGEPLA IALVARSLEE LSSLCLQGER MVQSDPAYAD
AVLHPSLRDR IFFSAEPIGK SGKIGFVYPG SGNHFAGMGM ELSARWPQVY RRQDGENLYL
RDQFQPEQFW NGAPMESVNE NHLAVIFGQV ATGCAVTDVV RQFGIDPSAV IGYSLGESAG
LFGSRTWIER DLMLSRMKAS TLFTRDLAGE CRAAREAWGE TEGKEIHWSI GVVDAPAREV
RRALKKTSRV YLLIVNTPDE CVIGGDVKWV KHLVAMLDCR FFPLQGVTTV HCEVARQVAN
PYRDLHNFNT TPPAGVTFYS GAAGAAYQVH RRSAADSILS QAIEGIDYPK VIEAAYAEGV
RYFIEMGPGG SCSRMIGRIL AGRPHMARSV CLPGVDANSA LLRLLAQLTS ERVPVDFEPL
FALAPARVSA TALVGEGKSL RFTTGGDPFA PSRPGMEASA PAQAAPPVRP QAPVSAAPAA
TKVAVPQPPQ IRRSTDAPVS TLSIPAADQV VAPTAPSTHN AATQAQPQAA QPQMGQPQVN
PAPLQAVSPL PIQGAIQEPL LREFAAAQEA SQQAHEAYLR VATDLSRSIA ETLALQISLQ
QQMLAAGMPL DAASAFPATG NYPGWSPEPA AAVPAAPPVT VRPAPYPGAL PALYDEQMCF
EFAVGSVAKM LGPEFAEADS FPTRVRLPDT PLQLVHRIVA LEGEPKSMTS GRVVTQHDVH
PGAWYLDGGR IPTCIAVEAG QADLFLSGYL GIDFITKGLA VYRLLDAVVT FHRELPGPGE
TINYDIRIER FFRQGETYLF RFHFEATVNG EPLLSMRNGC AGFFTQGELD AGKGIVRGAI
DLRPKTGKLP PDWKYLVPMQ PAAYSADQLN ALRRGDLAAC FGPLFAGLRV GRPLTIPGGR
MELVHRVMEL VPDGGRCGLG FIRAEADIHP DDWFITCHFV DDRVMPGTLM YECCMHTLRI
FLLRLGWVAE SDGAAWQPVP GVASQLCCRG QVLETTKVVT YEVTVRELGY RPEPYAIVDA
LMYADGKPIV EITNMSAQLT GTNHQALLEL WGAKGQELLS IIAAVPAQSA AGYDVKPAVY
TKAQILAYSN GKPSEGFGDR YRIFDSGRKI ARLPGPPFQF MDRVTAVRGE PWQMVPGAMA
EAQYDIPVDE WYFAADRQAR MPFSVLLEAA LQPCGWLAAY VGSALTTPND ISFRNLGGTA
VQHRAVTPET GTLTATATLT KAATSGGMII QEFSFSVADR QGVLYEGDTM FGFFAKEALA
NQVGIREAAP HQPTAEEVAR GKKLLYPESR PYPEKKLRMI DQIELYVADG GPAGLGYLKG
TKLVDPNDWY FKAHFYEDPV TPGSLGLESF LQLVKFAAVE RWGWQEGDTL AAVALEREHR
WLYRGQVVPT NKEVTVVAWI TAVDDANKVL TAAGFLYVDG RAIYQMNDFT LQLERG
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