Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_2089 |
Symbol | |
ID | 6782083 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 2415453 |
End bp | 2416304 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642768084 |
Product | DNA/RNA non-specific endonuclease |
Protein accession | YP_002138898 |
Protein GI | 197118471 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1864] DNA/RNA endonuclease G, NUC1 |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTGGACC GCTCAAAGTA CTCCTGCTAC ACTGCGCACC TGTCAGCACC CGGCTCTGAC CGGCATCCTT TCCTCTTAGT GGTATTCATG CGTCGACTCT GTCTTCATTC CTTGTTGCTG GTACTGTTTA CCGCTGTTTC CGTCTTTGCC GGCCCCCTCG ACGACTGCCG CGAGTACACG CAGTTTGGCG TCCCTGGCAC CTCTGGCGAT CTCCTTTGCC GCAAGGGATA CCTGCTCTCG CACGACGCCA AGCGCAAGAC CCCGGTCTGG GTCGTCGAGC GCATGACACG GGAGCGGCTA AAGGCGGTCC TGAAGCGCTC CGACCGTTTC GTGCCTGATG CGGAACTGCC CAAAGGGCAG CGGGCGGAAC TGTCGGACTA CAAAGGATCG GGATACGACC GGGGGCACAT GGCCCCAGCG GCGGACATGG CATGGGATGC AGCCGCCATG TCGGAGAGTT TCTATCTATC CAACATGGTT CCCCAGGCGG GGGAGGGGAT GAATCGTGGT ATCTGGGCCG AGTTGGAAAA GAAGGTGCGC CAGTGGGTGG AGAAGCGGGG GGGACTTTAC ATCTACAGCG GGCCGATCTA CGGCGAAGGT GAAGTGAAAA CCATCGGCCG CAACAAGGTG GCAGTACCGG ATGCTCTTTT CAAAGTGGTC CTCGATCCGG TAAGGCACGA AGCAATCGCG GTGGTCATGC CCAATCGTCC GCTCGACACC CGCGACATGC CGAAGTACCT GGTTCCGGTC CGCGAGGTGG AAAAACTGAC CGGCCTTGAG TTCTTCTCCA CACTTCCCCA GGAGGAGCAG GACCTGATCG AGGTTCCCAA GCCTGAGGCC CTGTGGCAAT AA
|
Protein sequence | MLDRSKYSCY TAHLSAPGSD RHPFLLVVFM RRLCLHSLLL VLFTAVSVFA GPLDDCREYT QFGVPGTSGD LLCRKGYLLS HDAKRKTPVW VVERMTRERL KAVLKRSDRF VPDAELPKGQ RAELSDYKGS GYDRGHMAPA ADMAWDAAAM SESFYLSNMV PQAGEGMNRG IWAELEKKVR QWVEKRGGLY IYSGPIYGEG EVKTIGRNKV AVPDALFKVV LDPVRHEAIA VVMPNRPLDT RDMPKYLVPV REVEKLTGLE FFSTLPQEEQ DLIEVPKPEA LWQ
|
| |