Gene Gbem_2089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_2089 
Symbol 
ID6782083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp2415453 
End bp2416304 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content60% 
IMG OID642768084 
ProductDNA/RNA non-specific endonuclease 
Protein accessionYP_002138898 
Protein GI197118471 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1864] DNA/RNA endonuclease G, NUC1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGGACC GCTCAAAGTA CTCCTGCTAC ACTGCGCACC TGTCAGCACC CGGCTCTGAC 
CGGCATCCTT TCCTCTTAGT GGTATTCATG CGTCGACTCT GTCTTCATTC CTTGTTGCTG
GTACTGTTTA CCGCTGTTTC CGTCTTTGCC GGCCCCCTCG ACGACTGCCG CGAGTACACG
CAGTTTGGCG TCCCTGGCAC CTCTGGCGAT CTCCTTTGCC GCAAGGGATA CCTGCTCTCG
CACGACGCCA AGCGCAAGAC CCCGGTCTGG GTCGTCGAGC GCATGACACG GGAGCGGCTA
AAGGCGGTCC TGAAGCGCTC CGACCGTTTC GTGCCTGATG CGGAACTGCC CAAAGGGCAG
CGGGCGGAAC TGTCGGACTA CAAAGGATCG GGATACGACC GGGGGCACAT GGCCCCAGCG
GCGGACATGG CATGGGATGC AGCCGCCATG TCGGAGAGTT TCTATCTATC CAACATGGTT
CCCCAGGCGG GGGAGGGGAT GAATCGTGGT ATCTGGGCCG AGTTGGAAAA GAAGGTGCGC
CAGTGGGTGG AGAAGCGGGG GGGACTTTAC ATCTACAGCG GGCCGATCTA CGGCGAAGGT
GAAGTGAAAA CCATCGGCCG CAACAAGGTG GCAGTACCGG ATGCTCTTTT CAAAGTGGTC
CTCGATCCGG TAAGGCACGA AGCAATCGCG GTGGTCATGC CCAATCGTCC GCTCGACACC
CGCGACATGC CGAAGTACCT GGTTCCGGTC CGCGAGGTGG AAAAACTGAC CGGCCTTGAG
TTCTTCTCCA CACTTCCCCA GGAGGAGCAG GACCTGATCG AGGTTCCCAA GCCTGAGGCC
CTGTGGCAAT AA
 
Protein sequence
MLDRSKYSCY TAHLSAPGSD RHPFLLVVFM RRLCLHSLLL VLFTAVSVFA GPLDDCREYT 
QFGVPGTSGD LLCRKGYLLS HDAKRKTPVW VVERMTRERL KAVLKRSDRF VPDAELPKGQ
RAELSDYKGS GYDRGHMAPA ADMAWDAAAM SESFYLSNMV PQAGEGMNRG IWAELEKKVR
QWVEKRGGLY IYSGPIYGEG EVKTIGRNKV AVPDALFKVV LDPVRHEAIA VVMPNRPLDT
RDMPKYLVPV REVEKLTGLE FFSTLPQEEQ DLIEVPKPEA LWQ