| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2083 |
|---|
| Symbol | |
|---|
| ID | 6782077 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | + |
|---|
| Start bp | 2408327 |
|---|
| End bp | 2409184 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642768078 |
|---|
| Product | Radical SAM domain protein |
|---|
| Protein accession | YP_002138892 |
|---|
| Protein GI | 197118465 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0535] Predicted Fe-S oxidoreductases |
|---|
| TIGRFAM ID | [TIGR01290] nitrogenase cofactor biosynthesis protein NifB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGACAT CGTGCGAGAA GATGAAGAAG ATCCAGGGGC ATCCCTGCTT TGGCGGCAAC
CACCATAAAA ACGGGCGGAT GCACCTCGCG GTGGCGCCCA AGTGCAACAT CAAATGCGGC
TATTGCACCC GGCGTCACGA CTGCGCCAAC GAATCGCGCC CGGGCGTCAC GAGCCGCCTG
CTCTCGCCGG ACGAGGCGAT CGTCAGGGTG AGGGAGGTGA TGGCAAGCCC CATCACCGGC
CCCATCATCA AGGTCATCGG CATTGCCGGG CCGGGGGATC CGCTCTTCAA CGAAGAGACC
TTCGACACCT TTCGTTACGT GGACCGGGAG TTTCCGCAGT TGATCAAGTG TCTGAGCACC
AACGGGCTGC TGCTACCCGA CAAGATGCCA GTGCTTAAGG AGATCGGACT GCACAGCCTC
ACCGTCACTC TCAACGCGTT GGACCCGAAG GTCGGCGGCA AGATCTACTC CCACGTCTTC
TATAAGGGGA CCAAATACAC AGGCGAGGAG GGGGCGGAGA TCCTGGTTCG TAACCAGTTG
GAAGGGATCC GCCAGGCGGC GGAACTGGGG CTGACCATCA AGATAAACAC GGTGCTGATA
CCCGGTGTGA ACGACGAGCA GATCCCGCTC ATCTCGAAGA AGGTTAAGGA ACTTGGGGCC
TTCGTGATGA ACATCATGCC GCTCATTCCG CAGGCCGATT TCGCCCATAT CGAGCCTCCT
TCAGCAGACC GGCTGGATGC GCTACGCCAG GATAACGAGA AGACCATTGG ACAGTTCAAA
CACTGCAAAC AGTGCCGTGC CGACGCGGTG GGGCTGATCT GCGAAAACCT GCAGCTCGCC
ATCGCCCCGG CGGCGTAG
|
|---|
| Protein sequence | MATSCEKMKK IQGHPCFGGN HHKNGRMHLA VAPKCNIKCG YCTRRHDCAN ESRPGVTSRL
LSPDEAIVRV REVMASPITG PIIKVIGIAG PGDPLFNEET FDTFRYVDRE FPQLIKCLST
NGLLLPDKMP VLKEIGLHSL TVTLNALDPK VGGKIYSHVF YKGTKYTGEE GAEILVRNQL
EGIRQAAELG LTIKINTVLI PGVNDEQIPL ISKKVKELGA FVMNIMPLIP QADFAHIEPP
SADRLDALRQ DNEKTIGQFK HCKQCRADAV GLICENLQLA IAPAA
|
|---|
| |