| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2048 |
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| Symbol | |
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| ID | 6782042 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 2358281 |
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| End bp | 2360395 |
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| Gene Length | 2115 bp |
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| Protein Length | 704 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642768043 |
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| Product | diguanylate cyclase with GAF sensor |
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| Protein accession | YP_002138857 |
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| Protein GI | 197118430 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCGAGG ATCTGCTGGC GGGGCTTAAG AGCCTTCCCG CGCTGGCGCC CTACAGCCTT
ACCCTTTATT GCCGCACGCC ATCTCGCGGA GAATTCGAGA ACTGTTATTC CCTTGTAGAA
GACGCGCTTT GCAGGGACGT GGCGCGGCAG TTTTTCGAAC CCAACATGGA GGTGTACTTC
CAGGAGGGAA CCACCTCGGT CTGTCGCTAC GGCGGCGGCT TCTTCGGCTT TGCCATCCCA
TTCCGGATCT GGAGCGACGA ATTCTGCCTG GTGGGAGACG GGGTGAGGGA CGATTCCATC
GACCTCTGGC AGCTTGCCGC CTTGGCCCGC TCCGGCGGCG GCGAAGTCTT TTCGCTGTTT
CCTTACGTGG AATCGCTTTG CACCGCTTCT CTTGCCGATG TCGAGCAGGT AGCCCACGAG
GTCGCCGAGG AAGTCGCAAA GCTGGTGGAA AAACTCTCCC TGGCGCCGCA GACTCCCGCC
CTACCCCCCT CCTCCCCCTC AGCCGCCGGC GAACCGGGCG AGGAACATTG CGACCCAAGG
CTTGACGTCG TGGCCCGCTC GCTGGAGGAG CTCGACCTTG CCAAAACGGT AACCGAGACG
ATCGGGCTTT GCTGCGAAAC CCTGGTCACC CATTTCAACT CACCCAAAAC CGCCATAGCG
CTCAGGGACG CCTCCGGCAC CTCCTTCCAG GTCAGCGGAA TCTGGGGACT CCCCGAAGAT
CTCGGCAGCA TCCCCGCCGA CGCCATGCAC CTCTTCATGG CGAAAGACCG CCGGGCGAAG
ACGGTGCTCT TCGACGCGCA GATGCGCGGA GTGCTCCCCG CTCTGCAGGC GACCGTCTGC
ACCTGTTTCC CGCTGCGCTG CCAGGACGAG CGGCTGGGGT TTCTGGCCCT GTTCGACGTC
GCCCCCGCGA AAAGCGATGC CCTGCTCATC TCCATGCTCG CCGGCGCGAC GGCCGCAAAG
CTTTCACGCA TCATCAAGGA TGCGGAGCAA TCCAAGGAGA ACGCCCTGTC CCAGCGGCTC
ATGTCGCTGA CCAACACGCT GCTGCAGGTG GACAGCAAGG ACGAGCTTTA CCAAGCCATC
CTCGAGATCG CCGCAGAACT GATCGACGCA ATGCAAGGGT CCGTCATGCT GATCGACAAG
GACGGGCAGA ACATGCACAT CGTCTTCACG CTCGGCATGA CCCTCAACAT CGCGCGCTGC
CTCCCGGTCA AGGTAGGCAA GGGCATAGCG GGAATGGTGG CGCAGTCGGG CCAGCCCCTG
CTGGTCAACG ACGTGGAGAA GGACAGCCGG GTCGCCATGG CCAACAGGCT CCGCTTCAAG
TCGAAATCGC TCATCTGCAT GCCGCTCAAG CTCAAAGACA AGATCATCGG CGTCTTGAAC
CTCTCCGACA AGAAGAACCT CGCCCCCTTC ACCGACGCAG ACCTGCAGGT GCTCACCTCC
TTCGCCAACC TGGCCTCGCT GATGATCGAG CGGACCGAGG TGCTGGAGGA ATCCGAGCGT
TTCGAGCAGC TTTCGGTCAC CGATGCGCTC ACCGGCCTTT ACAACCGCCG CTTCCTGAAG
AACCGGCTCG AGGAGGAACT GAACCGAAGC ATACGCCAGG GACTGAACCT CACCGTCATC
TTCATCGACC TCGACTTCTT CAAAAACTAC AACGACCTCT GCGGGCACCT GGCCGGAGAC
GACGCCCTGA GGACCACGGC GGAAATAATC AAGGCCTCGC TACGCGACAT GGACATCGTG
GCCCGCTACG GCGGCGAGGA GTTCTGCGCG GTGCTCCCGG GAACCTCGAA GGTGGAGGCG
ATGATCGTCG CCGAGCGGAT CAGGTCGGAG ATAGAGAGGG AAATTTTTCC CGGCGAAAGC
GAGATCCCGC AGGTCCGCCT CACCGCGAGC CTCGGGGTCG CCTCGTTCCC CGAAGACGGC
CGCACCTTCA CCGCCCTGGT GCACGCCTCC GACGTCGCCT TGTACGAGGC GAAGGCCGGC
GGCCGCAACC GCATTGTCGC CGCCCGCACC TCCCCCGGGC AAAAAGAGAC GCCGATCCCC
GCCACTCCCC CCAAAACGTC TAAGACCCTC GACTTCAACG CCTATCTGGA AGCCTCGGTG
GGTGCTAAAG GATAG
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| Protein sequence | MFEDLLAGLK SLPALAPYSL TLYCRTPSRG EFENCYSLVE DALCRDVARQ FFEPNMEVYF
QEGTTSVCRY GGGFFGFAIP FRIWSDEFCL VGDGVRDDSI DLWQLAALAR SGGGEVFSLF
PYVESLCTAS LADVEQVAHE VAEEVAKLVE KLSLAPQTPA LPPSSPSAAG EPGEEHCDPR
LDVVARSLEE LDLAKTVTET IGLCCETLVT HFNSPKTAIA LRDASGTSFQ VSGIWGLPED
LGSIPADAMH LFMAKDRRAK TVLFDAQMRG VLPALQATVC TCFPLRCQDE RLGFLALFDV
APAKSDALLI SMLAGATAAK LSRIIKDAEQ SKENALSQRL MSLTNTLLQV DSKDELYQAI
LEIAAELIDA MQGSVMLIDK DGQNMHIVFT LGMTLNIARC LPVKVGKGIA GMVAQSGQPL
LVNDVEKDSR VAMANRLRFK SKSLICMPLK LKDKIIGVLN LSDKKNLAPF TDADLQVLTS
FANLASLMIE RTEVLEESER FEQLSVTDAL TGLYNRRFLK NRLEEELNRS IRQGLNLTVI
FIDLDFFKNY NDLCGHLAGD DALRTTAEII KASLRDMDIV ARYGGEEFCA VLPGTSKVEA
MIVAERIRSE IEREIFPGES EIPQVRLTAS LGVASFPEDG RTFTALVHAS DVALYEAKAG
GRNRIVAART SPGQKETPIP ATPPKTSKTL DFNAYLEASV GAKG
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