Gene Gbem_2021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_2021 
Symbol 
ID6782015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp2326375 
End bp2327283 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content63% 
IMG OID642768016 
ProductExonuclease RNase T and DNA polymerase III 
Protein accessionYP_002138830 
Protein GI197118403 
COG category[L] Replication, recombination and repair 
COG ID[COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.688906 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGCGC TGGAGATTGA GGTGGCCATC GCCGCGCTTC ATTCCACAGG GGACTACCTG 
GTACTGCGGC GCCTGAACCT CGCGCGCGAC GCTCGCCTCG CCCGCAAGGC CCCGGAGTGC
TGCCAGGTCG CCCTTTGCCT GGACACCGAG ACCACCGGAC TCGACTATAA GCGGGACAAG
GTCATCGAAC TGGGGATCGT CGCTTTCGAG TACGACCCCG AGACCGGCGA GATCTTCAGG
ATCTCCGAGC GCTACTCCGG CTTTGAAGAT CCGGGGTTCC CCATCCCGGA AGAGGTGAAG
GAGATTACCG GCATCTCGGA CGACATGGTG CGCGGGCAGG CGTTCGACGA CGCCTTCATC
AACCTCCTGG CCGAGAAGTC CCACATGGTG ATCGCCCATA ACGCCGCCTT CGACAGGAAG
TTCGTCGAGG CGCGGTTCCC GGCCTTCACC AAGCTCCCCT GGGCCTGCAC CGTGTCGCAG
ATCGACTGGG GGGCGGAGCG GGTGTCTTCG CGTACGCTGG AATATCTCCT TTTCAAGACC
GCTTCTCTCA CCATCAACGC ACACCGTGCG CTCGACGACG CCGAGGGGGT GTTGGGGCTT
TTGCTGGAGC GGCTTCCGGT TACCGGCGCG CCCATCTTCC AGACTTTATT GAAGAGAGCG
CACGAGGTCA CCTCGCGGCT TTATGCCGTC TCCGCACCCT TCGACAAGAA GGATCTTCTC
AAGGACCGCG GCTATCGCTG GAGCGACGGG TCACAGGGGG GGAGCAAGGC ATGGTGGCGC
GATGTGCCTG CCGAGGCCGA GCCGGAGGAG CTCGCCTATC TGGCGAACGA GATCTATCCC
AGGGGGAACA CGAGCGCCGT GCAGATAATG AGGTGCGACG CGTATGCGAG GTTCTCCGCG
CGGGAGTAA
 
Protein sequence
MNALEIEVAI AALHSTGDYL VLRRLNLARD ARLARKAPEC CQVALCLDTE TTGLDYKRDK 
VIELGIVAFE YDPETGEIFR ISERYSGFED PGFPIPEEVK EITGISDDMV RGQAFDDAFI
NLLAEKSHMV IAHNAAFDRK FVEARFPAFT KLPWACTVSQ IDWGAERVSS RTLEYLLFKT
ASLTINAHRA LDDAEGVLGL LLERLPVTGA PIFQTLLKRA HEVTSRLYAV SAPFDKKDLL
KDRGYRWSDG SQGGSKAWWR DVPAEAEPEE LAYLANEIYP RGNTSAVQIM RCDAYARFSA
RE