| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2015 |
|---|
| Symbol | |
|---|
| ID | 6782009 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | + |
|---|
| Start bp | 2319773 |
|---|
| End bp | 2320744 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642768010 |
|---|
| Product | protein of unknown function DUF6 transmembrane |
|---|
| Protein accession | YP_002138824 |
|---|
| Protein GI | 197118397 |
|---|
| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCATCG GGGACATGTC GCCGGCTCTG CTCGCGGGGC TTCTCTACCT CGGCTCGGGC
CTCGGCCTGC AACTCGTCCT TTTTTTCCAA CGCAAAAACT CCCTCCATGA ACTGTCGCAC
CTCTCGCCGC GACACCGGCT CAAGCTGATC GGCGCGGTTA TCTCTGGCGG CATCATAGCC
CCTCTCTGCC TCGCCTTCGG CATCAAGTAC GGCACCGCTT CGGAGGTTTC GCTGCTCCTC
AACCTGGAGA CGGTGGCAAC CACTCTGATA GCCTGGCTCA TCTTCAAGGA GTACATCGGC
CCCTACGTCT GGACCGGCAA GGTGCTGATC CTCATAGGCG CCGGCTTGGT AGTGCTGAAA
GCGGAAGGGG GAATGTCCTT CTCTACCTCC GGGCTCCTGG TTATCTGCGC CTGCATCTTC
TGGGGCATCG ACAACAACCT GACCCGGGAC GTGGAGGAAC TTTCCTCCAC GGTGCTCGCC
TCTGTGAAAG GATTCGCCGC GGGTCTCTTT TCCATCTTCC TGGCGCTCGT CTTTACCACC
GGATCGGCCA CGCCCTCGCA AATCTACGGG GCCTTGGCTG TCGGCGCTCT CAGCTACGGG
TTGAGCCTGG TCTTGTTCGT CGAGGCCCTG CGGAAGATTG GAGCGGCAAG AACCGCTACC
TTTTTCGCAG TCGGTCCTTT CTTCGGCACG CTCCTATCGG TGGCGCTTCT GGGAGAGCGC
CCACCTGCTG CTTACTGGAT AGCCACGGTG CTGATGCTGG CTGGCATTGC GCTGCTCTAC
CTGGAAGTGC ACCGTCACAG CCACGCGCAT GAGGAAATGG CTCATACTCA TCCTCATATC
CACGACGAGC ACCACGATCA CGAGCATCCG GAAGGGGAGG GCGCTCTCTC TCACGACCAT
CATCACGTCC ATCGCCCTAT GAACCACTCG CATGTCCACT GGCCAGATAT TCACCACCAG
CATCCTCACT GA
|
|---|
| Protein sequence | MLIGDMSPAL LAGLLYLGSG LGLQLVLFFQ RKNSLHELSH LSPRHRLKLI GAVISGGIIA
PLCLAFGIKY GTASEVSLLL NLETVATTLI AWLIFKEYIG PYVWTGKVLI LIGAGLVVLK
AEGGMSFSTS GLLVICACIF WGIDNNLTRD VEELSSTVLA SVKGFAAGLF SIFLALVFTT
GSATPSQIYG ALAVGALSYG LSLVLFVEAL RKIGAARTAT FFAVGPFFGT LLSVALLGER
PPAAYWIATV LMLAGIALLY LEVHRHSHAH EEMAHTHPHI HDEHHDHEHP EGEGALSHDH
HHVHRPMNHS HVHWPDIHHQ HPH
|
|---|
| |