| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1979 |
|---|
| Symbol | |
|---|
| ID | 6781970 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | - |
|---|
| Start bp | 2282659 |
|---|
| End bp | 2283060 |
|---|
| Gene Length | 402 bp |
|---|
| Protein Length | 133 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642767971 |
|---|
| Product | Mov34/MPN/PAD-1 family protein |
|---|
| Protein accession | YP_002138788 |
|---|
| Protein GI | 197118361 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1310] Predicted metal-dependent protease of the PAD1/JAB1 superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.439505 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTCGAGA TACCGAAAGA GATACTGGCC GCGGTGATAA GCCACGCCCA GAACGGGTTT
CCGCTGGAGG TCTGCGGCAT ACTGGGCGGC AACGGACAGG TAGTGGCGAG CCACCATCCG
ATGACCAACA CCGACGCCAG CAACGACCAT TTCATGATGG ATCCGAAGGA GCAGTTCGCC
GTGGTCAAGG CGCTGCGAGC GAGCGGTGAG GAGATGCTGG TGATCTACCA CTCGCACCCC
GAGTCCCCCG CCCGCCCCTC GCAGGAAGAC ATCCGGCTGG CGCTGACCCC CAACGTCCAC
CACCTGATCG TGTCGCTTGA GGCACGGGAC AAGCCGGTCG CCAAGGCGTT CCGCATCGAA
GGCGGCGCGG TCGAACCGGT GGAGATTGTG GTAGCGGGAT AA
|
|---|
| Protein sequence | MVEIPKEILA AVISHAQNGF PLEVCGILGG NGQVVASHHP MTNTDASNDH FMMDPKEQFA
VVKALRASGE EMLVIYHSHP ESPARPSQED IRLALTPNVH HLIVSLEARD KPVAKAFRIE
GGAVEPVEIV VAG
|
|---|
| |