| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1966 |
|---|
| Symbol | |
|---|
| ID | 6781956 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | + |
|---|
| Start bp | 2270463 |
|---|
| End bp | 2271308 |
|---|
| Gene Length | 846 bp |
|---|
| Protein Length | 281 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642767958 |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_002138776 |
|---|
| Protein GI | 197118349 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.861168 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAACAAC TGCTGATAGT CGGTTGCGGC GCCATTGGGC GACGGGTCGC AGCGCTGGCG
CTTGCGCGGG GGATGAAGGT CTCCAGCTTC AGAAGGAACG AAGAAGAGGT TGCAGGCGCG
ACCACATACA CCGGAAACCT GGACCAGCCG GCGACGCTTG CGGGACTGCC GGTCAAAGGT
GCTGGGGTTA TCTACCTCGC GCCCCCTCCG GGTGGAGGCA ACGAGGATAC TAGGATGCGC
AACTTCTTGG CCTCCATCGC CCCCGGGCAA GAGCCCGAAA AAATGGTCTA CATATCGACC
AGCGCGGTCT ACGGGGACTG CGGCACCGCG ACGGTCACCG AGGAGAGTGA GGCCAACCCG
CAGACCAGCA GGGGAAAGCG CCGGCTGCAC GCCGAGCGCC TGCTAAGCGA CTGGGGGAGG
GAGCGCCACG TTCCCGTTGT GATCCTCAGG GTAACTGCCA TTTATGCTGC GGACCGCCTC
CCCGTCACCC AGCTCACCAC CGGGCAGCCG GTGCTGCGCG AGGAGGAATC GCTTCCCAGC
AATAGAATCC ATGCCGACGA CCTGTCGCGG ATCTGCCTCG CCGCCCTGGA GCGGGGGAAA
GACGGGGCAA TCTTCAACGT GAGCGACGGC CAGTCCACCA CCATGACCAG CTATTTCAAC
GCCGCCGCCG ATCGGCTCGG GCTCCCGAGG CCGCGCCAGG TGGCCATGGA GGAGGCGCGC
CGGGTGATGA GCCCGCTCAT GATCTCCTAC TTCTCCGAGG GGAGGGTGGT GTCGAACCGC
AAAATGATTG AGGAGCTGGG GATAGAGCTC CTCTACCCTG ACCTCGAGTC GGGGCTCAAG
GGGTAG
|
|---|
| Protein sequence | MEQLLIVGCG AIGRRVAALA LARGMKVSSF RRNEEEVAGA TTYTGNLDQP ATLAGLPVKG
AGVIYLAPPP GGGNEDTRMR NFLASIAPGQ EPEKMVYIST SAVYGDCGTA TVTEESEANP
QTSRGKRRLH AERLLSDWGR ERHVPVVILR VTAIYAADRL PVTQLTTGQP VLREEESLPS
NRIHADDLSR ICLAALERGK DGAIFNVSDG QSTTMTSYFN AAADRLGLPR PRQVAMEEAR
RVMSPLMISY FSEGRVVSNR KMIEELGIEL LYPDLESGLK G
|
|---|
| |