Gene Gbem_1864 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_1864 
Symbol 
ID6781853 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp2157379 
End bp2158761 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content64% 
IMG OID642767855 
Productmulti-sensor signal transduction histidine kinase 
Protein accessionYP_002138674 
Protein GI197118247 
COG category[T] Signal transduction mechanisms 
COG ID[COG5002] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.793429 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGTTAA AAGTCATCGG CATCCAGTTC GCAGTCGTCA TGGCGTTTGC TGCGGTACTT 
TGCAGCTACG AGCAGCGCCT GCTCGGAGTT GGCTGGGCTT TGCTCTTGAC CGCCACCATC
GTCGTCTGCT CCACCTACCT TCTGGCCGAT CTCGGCACCA GGCCGCTTAG GGCCGTTGCC
GCCATGGCGT CCAGGATCGG CAAGGGAGAG ATCAACACCA AGCTTCCCGC GGTAACCGAC
CCTCAGGTCA CCGAGCTTGC CAGGGTGATC AACGAAATGG CGGCAAAGGC CAACGCGCAA
CTGGACCGCT TGGAGGCGGA GAAGAATCGG CTGGACGCCA TCCTGCGCGG CATGGGCGAA
GGAATCATGG TGGCCGACCC TCAGGGATGC ATCACGCTGG TCAACCCCGC CTTCAAGGGA
CTCTTCGGGC TGCATGACGA GGTGGAAGGA CGGCTGCTCA TCGACATATC GCGCCATCCC
GCGCTGCACG AGTCGTTCAG GGACATCTTG TCTTCGCGCC AGGAGCGCGT CGAGGAGCTG
CAGTTGCACT CCCCTAAAGA GCGCTCGCTG CTGGTCCACT GGGTGCCGCT CGTGGAGTGC
GGGGTGGTGA CCGGCGTGGT GGCGGTATTC CACGACATCT CCGACCTCCG GCAGATGGAG
AAGATGCGGC GCGACTTCGT CGCCAACGTC TCCCACGAAT TGCGCACTCC CATCACCATC
ATCAAAGGGT ACGCAGAAAC GCTTCTGGCC GGGGCACTGG AACACCCGAC CCAGGCAACG
AAGTTCGTCA GCATCGTGCA CTCGCACGCG GACCGGCTCG CCTCCCTGGT CAGCGACCTG
CTCACCCTGT CCCAGCTGGA GTCGGGTGCG GTCCCCCTGG AGGCCAGGAG CGTGAAGGTG
CAGGAGATAG CGGAACGCGT GGTCGTCCTG CTGGAGCGCA AGATCCGGGA GCGCGGCATC
ATAGTCGACC TCGCCGGACT TAAGGATGCT CCCAGCGTGA TGGCAGACCC GGGGCGCCTC
GAACAGGTGA TCGTCAACCT GCTCGACAAC GCGGTGAAAT ACACCCCCGC CGGGGGCTCG
GTGACGCTCA GCGCGGCTGA TCGTGAAGAA AGCGTCACCA TCGCGGTCCA GGATACCGGC
ATCGGCATCC CCTCCAAGGA CCTCTCGCGC ATCTTCGAGC GTTTTTACCG GGTCGACTCG
GCGCGCAGCC GCGACGAAGG GGGAACCGGC CTCGGGCTTT CCATCGTGAA ACACATAGTC
CAGTTGCAGG GTGGAACGGT GTCGGCGCAA AGCTCCGGAC AGGGCTCCAC CTTCTTCGTC
ACCCTCAACC GGGCCGACCC GACTTACGGC TCCGGCATAG CGCCGGCCGC GGCCCAAGCC
TGA
 
Protein sequence
MRLKVIGIQF AVVMAFAAVL CSYEQRLLGV GWALLLTATI VVCSTYLLAD LGTRPLRAVA 
AMASRIGKGE INTKLPAVTD PQVTELARVI NEMAAKANAQ LDRLEAEKNR LDAILRGMGE
GIMVADPQGC ITLVNPAFKG LFGLHDEVEG RLLIDISRHP ALHESFRDIL SSRQERVEEL
QLHSPKERSL LVHWVPLVEC GVVTGVVAVF HDISDLRQME KMRRDFVANV SHELRTPITI
IKGYAETLLA GALEHPTQAT KFVSIVHSHA DRLASLVSDL LTLSQLESGA VPLEARSVKV
QEIAERVVVL LERKIRERGI IVDLAGLKDA PSVMADPGRL EQVIVNLLDN AVKYTPAGGS
VTLSAADREE SVTIAVQDTG IGIPSKDLSR IFERFYRVDS ARSRDEGGTG LGLSIVKHIV
QLQGGTVSAQ SSGQGSTFFV TLNRADPTYG SGIAPAAAQA