| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1799 |
|---|
| Symbol | |
|---|
| ID | 6781788 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | + |
|---|
| Start bp | 2080099 |
|---|
| End bp | 2083389 |
|---|
| Gene Length | 3291 bp |
|---|
| Protein Length | 1096 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642767792 |
|---|
| Product | Fibronectin type III domain protein |
|---|
| Protein accession | YP_002138611 |
|---|
| Protein GI | 197118184 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAGC GTAACGCAAT ACTCACCGCA ACCTTAGGAA TCCTCTTGTA CACGAACGTC
GCCTCTGCCG CAGTGTTGTT CTCCGACGAT TTCGATTCCC GCAGCGATTG GAGCCCGGCA
CAGGGGGCTT CCGGTGCTAC CTGCATCCCA GGGCAGAACT GCGCCACGCC GATCCCGGAT
GGCTACTACG ATTACCGCGT GGCGGGAACC GAGGCCTGCA GCAACACCGA CGGCAACCAC
AATACCCTGA ACATCAATGG TCAGCACCCC AGGGGGGGAG CCGGCAAGAG CTTCATGATG
TGGAACGAGC CCTGCTACAG CAGGAGCGGC AGCTGGGGAT CCGACGGCCT CCTGGGCATC
GATTTCGCCC CGCAAAACGA GGTGTACGTC AGGTATTGGG TCCAGTTCCA GCCGGACTGG
AGGTGGAATG GCGACGGCTC CATCGATGGG CTGGCCTTGG GTACGGCAAA CCCGAGCCCG
ATGCAAAAGT TCATGCACAT CTCCCACCTG GACCCGACGA ACCCAAACCT CTGGGATTTC
TTCAGCGGCA CCCAAAACAA GCCTCGCTTC ACCCCGCAGC TCGCCAAATT CGGCGGCGGC
AGCTATCGGC TTCAGTTCAA CCTCCCGCAT TCCCCTTTGA CTGCTGCACG TGATAGTTCC
GCCTCTTTCA CTACTAATGT ATACCTCGGC GCTGCCCCTC TCGACATGAA CGTACCGGGC
CCCGCCGGTT TGCCGGCAGC TCCGCGCGAC GGCGGGTGGC ACAGCTTCGA GTTCTACGTC
AAGCTGAACA GCGCAGGCGG GGTCGCCGAC GGTATCTCCA AGGTCTGGTA CGACGGCGCC
CTGGTCGAAT CGACCACGAA CGTGGTGTGG GTTCCCTTAG GTGACGACCC GGCGCAGTGG
AAGTGGAATC ACGCCTGGCT GGGCGGCAAC AACGCCAACC TCTACCTTCC GGCCAACGAG
CAGTGGTACG CCATAGACGA CGTGGTGGTG AGCACCACCT ACAGCGGTCC TCCGGCGCAG
CCGTTGAGCC TGAGCGCCGC AGCCGTCGCG GCAAACACCG TGAGCCTGAG CTGGAGCGCC
GGTAGCAACG GGGTCGCGTA TAACGTAGAC GGCTACCGCA TCTACTACGG CAAGGACGCC
TCCAACTTGG ACATGAAACT GGACGCGGGG AACGTGCAGC AATACGACAT CTCTTCCCTC
GACCCCTCCA CCAAGTACTA CTTCGCGGTC TCCGCCTACA GCAAGGGGAG CTACGACAGC
AACGACAACG AAGGTATGCG CTCGGTGACG GCAAGCGCGA CCACCGCTTC CGGTGCTGCC
ATCGCGGTTG CCGATGCGGT TGCACCGGTG GATTCCATCT CCTCGCCGGC TAACGGCTCC
ACCGTGAGCG GCAACGTGAC GGTGAACGTG GCAGCCAGCG ACAACGTGGC GGTCAGCAAG
GTAGAGCTGT ACCTGAACGG TTCCATCTTC GGCGTGGTGG GTTCGGCTCC CTACACCCTG
AGCTGGAATA CGGCCAACAA CCCCAATGCT ACCTACACCC TGACCGCGAA AGCGTATGAC
GCAGCCGGTA ACGTGGGGCA GACAACGAGC TCCGTGGTCG TGAAAAACGC AGTCGCAGTC
CTCGATGCTT CGGCCCCGGT GATCGGCTCC TTCACCATGC CCGCTTCCGC CACCTCGCTG
ACCGTTCCGG TTAGTGCCTT TGCCGCCAGC GACGACATCG GCGTCACCGG CTACCAGATC
ACCGAGAACG CGACGGCCCC GGCGGCAGAC GCCACCACCT GGAAAACAAG CGCACCGACC
AGCTTCACCT TCTCCGCAGC AGGTTCCCGC ACCGCCTACG CCTGGTGCAA GGACGCCTCC
GGCAAGGTAT CGGCAGCCAA GACCGCCCTG GTCAGCATCA CCATCGCCAC TGCCGACACG
GCCGCCCCGG TGGTCGCCTT CACCTCTCCG GTGGACGGTT CCAAGGTCAA GGGGACGGTA
ACCGTGTCCG CCAACATCAC CGACAACGTC GCCGTGAGCA AGGTCGAGTA CTACGTGAAC
GGCCTGCTCA AGCTGACTTC CACCTCCGCG CCCTACTCGG TTCCCTGGGG CACCACCAAC
TACCCCGACG GCTCCAACAC CATCATGATC AAGGCCTATG ACGCAGCCGG CAACGTCGGT
CAGTCCAGCG TCACGGTCAT CGTCGCCAAC GACGCGATCG CGCCGTCGGT CTCCATCGTC
TCCCCGGTGG CAGGCTCCAC TATCGGCGGC ACGGTATCGG TATCGGCAAA CGCCAGCGAC
AACCTGGCGG TTGAGAGGGT AGAGCTCTAC CTGAACGGCG CGCTGGTGGC GACCTCCACC
GCGGCTCCCT ACGGCTTCAG CTGGAACACC GCGAATGCAG CAAACGGCTC CTACACGGTG
AGCGCCAAGG CTTATGACGC AGCCGGCAAT GTCGGCCAGG CCTCGGCAAC GGTCAGCGTA
TTCAACGACA CCACCGCCCC CTCGGTCGCC ATCTCCTCCC CGGTGGCAGG TTCCACGGTG
AACGGTACCG TCAGCCTGTA CGCCAATGCC AGCGACAACG TTGGGGTGAC CAAGGTCGAG
TTCTACCTGG ACGGCGCCCT GCAGGCGACC TCCACCGCGG CTCCCTACGG CTTCAGCTGG
AACACCGCGA ATGCAGCAAA CGGCTCCTAC ACGGTGAGCG CCAAGGCTTA TGACGCAGCC
GGCAATGTCG GCCAGGCCTC GGCAACGGTC AGCGTATTCA ACGACACCAC CGCCCCCTCG
GTCGCCATCT CCTCACCGGT GGCAGGTTCC ACGGTGAACG GTACCGTCAA CCTGTACGCC
AATGCCAGCG ACAACGTTGG GGTGACCAAG GTCGAGTTCT ACCTGGACGG CGCGCTGCAG
GCGACCTCCA CCGCGGCTCC CTATGGTTTC AGCTGGAACA CGACGACCGC AGCCAGCGGG
ACCCACACCC TGAGCGCCAA GGCCTACGAC GCGTCCGGGA ACGTCGGCCA GTCCGCCAGC
GTAAGCGTCA ACGTCGTGAA CGACTCGGTG GCCCCGGTGA TCAGCGTGAG CGCCCCGACC
AAGGACTACC TAACCTCCAG CAAGCTCCCC ATCTCCGCCT CCGCGACGGA CAACGTGGCA
GTCGTCAAGA TGGAAGCTTA CGTGGACAAC GCCCTGGTGA TATCCACCAA CAACTCCTCT
TTCAGCGTCA GCACCAACAT TGCGAAGGGG GTCCACACCG TCACCATCAA GGCCTACGAC
GCCTCCAACA ACGTCGCAGT GTTCAGCAAG ACGGTCAACA GGTTCTTCTA A
|
|---|
| Protein sequence | MKKRNAILTA TLGILLYTNV ASAAVLFSDD FDSRSDWSPA QGASGATCIP GQNCATPIPD
GYYDYRVAGT EACSNTDGNH NTLNINGQHP RGGAGKSFMM WNEPCYSRSG SWGSDGLLGI
DFAPQNEVYV RYWVQFQPDW RWNGDGSIDG LALGTANPSP MQKFMHISHL DPTNPNLWDF
FSGTQNKPRF TPQLAKFGGG SYRLQFNLPH SPLTAARDSS ASFTTNVYLG AAPLDMNVPG
PAGLPAAPRD GGWHSFEFYV KLNSAGGVAD GISKVWYDGA LVESTTNVVW VPLGDDPAQW
KWNHAWLGGN NANLYLPANE QWYAIDDVVV STTYSGPPAQ PLSLSAAAVA ANTVSLSWSA
GSNGVAYNVD GYRIYYGKDA SNLDMKLDAG NVQQYDISSL DPSTKYYFAV SAYSKGSYDS
NDNEGMRSVT ASATTASGAA IAVADAVAPV DSISSPANGS TVSGNVTVNV AASDNVAVSK
VELYLNGSIF GVVGSAPYTL SWNTANNPNA TYTLTAKAYD AAGNVGQTTS SVVVKNAVAV
LDASAPVIGS FTMPASATSL TVPVSAFAAS DDIGVTGYQI TENATAPAAD ATTWKTSAPT
SFTFSAAGSR TAYAWCKDAS GKVSAAKTAL VSITIATADT AAPVVAFTSP VDGSKVKGTV
TVSANITDNV AVSKVEYYVN GLLKLTSTSA PYSVPWGTTN YPDGSNTIMI KAYDAAGNVG
QSSVTVIVAN DAIAPSVSIV SPVAGSTIGG TVSVSANASD NLAVERVELY LNGALVATST
AAPYGFSWNT ANAANGSYTV SAKAYDAAGN VGQASATVSV FNDTTAPSVA ISSPVAGSTV
NGTVSLYANA SDNVGVTKVE FYLDGALQAT STAAPYGFSW NTANAANGSY TVSAKAYDAA
GNVGQASATV SVFNDTTAPS VAISSPVAGS TVNGTVNLYA NASDNVGVTK VEFYLDGALQ
ATSTAAPYGF SWNTTTAASG THTLSAKAYD ASGNVGQSAS VSVNVVNDSV APVISVSAPT
KDYLTSSKLP ISASATDNVA VVKMEAYVDN ALVISTNNSS FSVSTNIAKG VHTVTIKAYD
ASNNVAVFSK TVNRFF
|
|---|
| |