| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1777 |
|---|
| Symbol | |
|---|
| ID | 6781766 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | + |
|---|
| Start bp | 2048695 |
|---|
| End bp | 2051103 |
|---|
| Gene Length | 2409 bp |
|---|
| Protein Length | 802 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 642767770 |
|---|
| Product | glycosyl transferase family 2 |
|---|
| Protein accession | YP_002138589 |
|---|
| Protein GI | 197118162 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTATGGA CCGAAATCAC CATGATTGCG CTGCTTTTGC TCCTGGCCTA CATATACCTG
GGGTACCCGC TACTTCTTTG CCTGCTGGCG CGCCTCATCC CCACGACCCA CCGTACCGAT
GACGGTTTTC TTCCCACGGT CACTCTGGTC ATTTCCGCCT ACAACGAAAA AGGGGTTATC
AGGGCGAAAC TGGAAAATTC GCTGGCCCTT GACTACCCGC AGGAAAGGCT CTCCATCTTG
GTCGTGTCCG ACTGCTCCAG CGACGGGACT GACACGGAGG TGCTCTCTTT CTCGGACAAA
GGGGTGAAGC TCATGAGGGC AGAGGAGCGC CGGGGGAAGA CGTCGGCCAT CAACACGGCG
CTTGCCTGTG TCGATAGTGA GATGGTGGTC TTCTCCGACG CCAACGCCAT CTACGACGCA
ACGGCCATCC GCCGGTTGGT GCGGCATTTC GTCGATCCAA GCATTGGTTA CGTCGTCGGA
TGCGCCCGAT ACGTGGAGGA GACCGTCAGC GCCGCCGGCG GCAGCGAAAG TACTTACTGG
GACCTCGAGG TGATGCTGAA ACGGTGGGAA TCGCGCCTTT CATCAGTGGT TGGAGGGGAC
GGAGCCATCT ATGCGATTCG CCGCTCGCTA TACGAGCCAC TTAAGGAAGA GGACATCAAC
GACTTCGTCA ACCCCCTTCA GATCGTCGCC AAGGGGTACC GCGGCGTCTT CGACGAGGAG
GCGTGGTGCG TGGAGCGTCC CGCCGGTGAA TTCCATAAGG AGTTTTCCCG AAAGGTGCGT
ATCGTGAACC GCAGTTTCAG CGGGTTTTTG CGGGTGCCCC GGGCGGCGAA CCCAATGGTC
ACTGGAGCCT TTGCCTGGCA GCTCGTTTCC CACAAGCTCC TGCGCTGGTT TTCCCCCTGT
TTTCTCGGCC TGTTTTTTGT CTTCCTGGTG CTGAACCGGC TGCTGTATTC TGCCTCCCTC
ACTGGAGAGG TTTTGCTGAC CTTGACTGCG ATGGGTGCGT TCATCTCCAT GCTCGGCGCG
CTCCTGAACC GTTTCTGGCG GGTCCCCCTG CCGCTGCTCC TTCCTTACTA CTTCGTACTG
GTGAATACGG CCTCCGCCCT CGGGGTGTTT TATCGCCTGT TGGGCCGGAC CATAGTGACC
TGGAGCACTG TAAGGGAGGG GGAGGCTGCT CCCCCGCCAG CGCCGCTTTT GCCGCGCTTG
GCCCTTCTCT GCGTCGCGGT GCTGCTCGTG GTTACGGCAA GCGGGGTGGC GCTGGATGAG
GATGCCCTCG GCGCGGCTGC CATTCTGCTG ATGCTCCTGC TGGTTCACAC ATTCGTCGGT
TACCAGTTAC TTTTGCTGCC GCTGTCGCGT CTCTCACGCA GAAAACCAGC TCGGGACGAA
AGCTACACCC CCATGGTCAC TCTGCTGGTT GTCGCCTATA ACGAGGCGAA GGTGATCGAG
AAAAAGCTCT TGAACTCTCT GGAACTGGAG TATCCCAGCG ACCGGCTGCG CATCCTTGTC
GCCTCGGACG GCTCCAAGGA TGGCACCGAC GAGATTGTCT CCCGATTCCT GGACAGGGGG
GTCGAGCTCA TCTCCTTTCC GGGAAACCGC GGGAAGATTT CCGCCCTGAA CGACGCCATG
CGGCAGATCA ACTCTGACAT CGTCGTTCTA TCCGACGCAA ACGTCTACTA CATGCCCAAC
GCCATCAGGA AACTAGTGCG AAACTTCGCC GACCCGGAGG TCGGCGCGGT TTCGGGTAGG
GTGGTGCTCA TAAATGACAG CCTGAGTTAT AGCGCAGCCG AGAAGTCCTA TTACTCCATC
GAGCACCTGA TACAGGAACT GGAGGGAAGT CTCGGTGCTC TCATCGGCGC GGACGGCGCC
ATGTACGCTA TCCGCAGGCA GCTCTTCACC CCCCCAAGCC CCGATACCAT CCTCGACGAT
TTGGTAATCG CGATGGGCAT TGCCCGGCAA GGGCACTTGG TCATGCACGA AAAAGAGGCG
CTTGGATTCG AGGAGAACCT GTTGGAGATA GTGGGGGAGT TCCGCCGCAA AGTGAGGATC
ATTGCCGGCG GCTACCAATG CCTCTTGCGC GGGGACGTGA TTCCCAGGCT GTCCCAGCCG
CTGCTCATGT TCTGCTTCAC CTCCCATAAA CTGCTGCGCT GGGTGAGCGG TTACCTGCTC
GTTGCTTTGG TTGGAGTGCT GGTGCAGATC CAACTGCGCC ATTCATCATC CAAATATGCG
CTGGTGTTGG CAGCACTGCT TGTCGCCCTC GTCCTGGCTT TGCTGGTGCA ACTGTTTCCG
AGGATGAAGT CGCTCAAGAT CGCATCCCTT TGCCACTACT TCTATATGCT GATGGCCGCC
TCGCTGCTCG GGGGGTACCG CGGTGTTACC GGTAGACAGA AGGTGACCTG GCGTGGGGGG
ACGGCCTGA
|
|---|
| Protein sequence | MVWTEITMIA LLLLLAYIYL GYPLLLCLLA RLIPTTHRTD DGFLPTVTLV ISAYNEKGVI
RAKLENSLAL DYPQERLSIL VVSDCSSDGT DTEVLSFSDK GVKLMRAEER RGKTSAINTA
LACVDSEMVV FSDANAIYDA TAIRRLVRHF VDPSIGYVVG CARYVEETVS AAGGSESTYW
DLEVMLKRWE SRLSSVVGGD GAIYAIRRSL YEPLKEEDIN DFVNPLQIVA KGYRGVFDEE
AWCVERPAGE FHKEFSRKVR IVNRSFSGFL RVPRAANPMV TGAFAWQLVS HKLLRWFSPC
FLGLFFVFLV LNRLLYSASL TGEVLLTLTA MGAFISMLGA LLNRFWRVPL PLLLPYYFVL
VNTASALGVF YRLLGRTIVT WSTVREGEAA PPPAPLLPRL ALLCVAVLLV VTASGVALDE
DALGAAAILL MLLLVHTFVG YQLLLLPLSR LSRRKPARDE SYTPMVTLLV VAYNEAKVIE
KKLLNSLELE YPSDRLRILV ASDGSKDGTD EIVSRFLDRG VELISFPGNR GKISALNDAM
RQINSDIVVL SDANVYYMPN AIRKLVRNFA DPEVGAVSGR VVLINDSLSY SAAEKSYYSI
EHLIQELEGS LGALIGADGA MYAIRRQLFT PPSPDTILDD LVIAMGIARQ GHLVMHEKEA
LGFEENLLEI VGEFRRKVRI IAGGYQCLLR GDVIPRLSQP LLMFCFTSHK LLRWVSGYLL
VALVGVLVQI QLRHSSSKYA LVLAALLVAL VLALLVQLFP RMKSLKIASL CHYFYMLMAA
SLLGGYRGVT GRQKVTWRGG TA
|
|---|
| |