Gene Gbem_1730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_1730 
Symbol 
ID6781718 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp1994019 
End bp1994906 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content66% 
IMG OID642767722 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002138542 
Protein GI197118115 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACAGT CAGACACAAT AGCTCTCGCG CCCGCAGCTC AGGTCCTGGC GCAGCGTGCC 
CCCGGCCCAG TCGTGGTCGA GGTCGAAGCG GCGCGACCGC TCTCCCCAGC CGAGAGGCTC
TGGAACGTGG CGGCGCTCCG CAAGCTGCTC CTTCTTTCCC TGCTCCTCGC GCTCTGGCAG
GTTTACGCCG TCACGCTCGA CAAGCCGCTG CTCTTTCCGA CCCTGGACGA TACGCTCGCC
GCGCTTTGGA ACGGCATCCT GCACGGGGAG CTCCTGGGGC GGGTGGGGCA TTCGCTACGG
ACGCTGGTGA CCGGATACGC CATCGGCGCC ACACTCGCCG CGCTTCTCGC GGTGGCGGCC
TACAGCACCA GGTTCGGCAA CGACCTGATG GAGATACTGA CCGCGACCTT CAACCCGCTC
CCCCCCATCG CGCTTCTCCC GGTCTCGCTG ATCTGGTTCG GGCTGGGGCA GGCGAGCATT
GTCTTCGTGC TGGTGCACGC GGTGCTCTGG CCCATGGCGC TGAACGCCCA CACGGGGTTC
ACCGGCATCA CCCCCACCAT CCGGATGGTC GGGCGCAATT ACGGGCTCAC CGGCTGGCGC
TTCGCCTGGC GCATCCTCTT CCCGGCCGCG TTTCCGCAGC TCCTCACCGG GTTGAAGATC
GGCTGGGCCT TCGGCTGGCG CTCGCTCATC GCCGCCGAGC TGGTCTACGG GGTAAGCTCC
GGCTCCGGCG GGATCGGGTG GTTTATCTAC GAAAACAAGA ACCAGCTGGA GACCGCCTCG
GTCTTCGCGG GGCTATTGAC CATTATCCTG ATCGGGCTGG CCGTCGAGAA CCTGCTCTTC
GCGGGGATCG AGCGACGGAC GGTACTACGC TGGGGAATGA AGCACTGA
 
Protein sequence
MEQSDTIALA PAAQVLAQRA PGPVVVEVEA ARPLSPAERL WNVAALRKLL LLSLLLALWQ 
VYAVTLDKPL LFPTLDDTLA ALWNGILHGE LLGRVGHSLR TLVTGYAIGA TLAALLAVAA
YSTRFGNDLM EILTATFNPL PPIALLPVSL IWFGLGQASI VFVLVHAVLW PMALNAHTGF
TGITPTIRMV GRNYGLTGWR FAWRILFPAA FPQLLTGLKI GWAFGWRSLI AAELVYGVSS
GSGGIGWFIY ENKNQLETAS VFAGLLTIIL IGLAVENLLF AGIERRTVLR WGMKH