| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1628 |
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| Symbol | |
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| ID | 6781616 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 1889295 |
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| End bp | 1891067 |
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| Gene Length | 1773 bp |
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| Protein Length | 590 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642767622 |
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| Product | type I phosphodiesterase/nucleotide pyrophosphatase |
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| Protein accession | YP_002138442 |
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| Protein GI | 197118015 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3379] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAAGA CGATTTTTCT CGGCATCGAC GGCATGGACC CCAAGATTGC CGAGCAACTG
ATGAGTGCAG GCCAGCTCCC CAACTTCGAG CGGCTCGCAG CCCGCGGCCA CTACAGCCAG
CTTGCAACTA TTAACCCGCC GCAGTCTCCG GTCGTCTGGT CCACCATCGC CACCGGCCTT
GCCCCCAGCG GCCACGGCAT CTACGACTTC ATCCATCGCG ATCCTGCCAC GTACAAGCCT
TACCTCTCGC TGCACCGTAT TGAGCACGGC AGATACGTCA ATCCCGTGCA GGGGGAAACC
TTCTGGGAAA AATGTGCCGC AAAAGGAATC GGGTCCACCC TTCTCAAATG GCCCATGGGG
TTTCCCCCCC GCCCCTTCCC TGGGCAGATG CTCGCGGGGC TCGGAGCACC GGACCTCCGG
GGAATGCTCG GCACCTACAC CTGCTATACC TCCGCTCCGG AAAAGATGGA GCGCGATGCA
AAAGGACGTA TTGTTCCTGT ACCAGGTAGT GCCCAATCCG TCCAGACCGA CATCACCGGT
CCTTTCACGG TGGGACTCAC CGGGAGAAAG GCCACCACGA TACCGCTTAA CATCCAGCTC
GACGCGAACT CGGTCACCTG CCGGATCGGA CGCCAGAGCT TCACCCTTGC GCCTGGTCAG
TGGAGCCCCT GGCTCACCAT AGTCTTCGAC ATCGGGTTTT TTAGGACCGT AAAGGGAATC
TGCCGGTTCT ACCTCTCAGG GCTACACCCG GAGTTCTCCC TCTACATGAC GCCAGTAAAC
GTCGCCTTCG ACAGCTCCGA ATTCCCTATT TCACACCCGG CCGATTACGC GGTCGAACTG
GCAGACGCCA TCGGGCCCTT CTCCACGTTA GGGTTAGCTG AGGACACCAA TGCGGTTAAC
GACGGCGCGC TCGACGAGGA CGGTTTCATC TCCTTATGCG ATGGTATCAT GGCAGAACGC
GAGTCGATGT TCTTGTATGA GTTGTCCCGC TTCCGCGAAG GACTCCTCGC CTGCGTCTTC
GATACCACCG ACCGTATCCA GCATATCTTC TGGCGCATGC ATGACACAGG ACACCCTATG
CACGACCCAG CCCTTGCCGA GAGCTACAAT GATGTCATCC CGCGCTACTA CCGTTGGATG
GATCGCATAC TGGGGGTGGT CCTTGATCGC GCGCCCGACG CGGCGCTTAT CTGCTGCTCC
GACCACGGTT TCTGCAGCTT TCGCCGTTCG GTCCAGGTCA ACGACTGGCT GCTGCGGGAG
GGATTCCTGG CCCTAAAACC TGGTGCCAAG CTATGCGAGG GGCTCTTCGA GGAAATTGAC
TGGTCCAGGA GCCAGGCCTA TGCAGCCGGG CTGAACAGCA TTTATCTCAA CCTGCGCGGA
CGCGAGAAAG AAGGGATCCT CAACGAGAGT GAGCTACCGG CATTGAAAAG CAAACTGGCT
GCAAGGCTCG CCTCCTTGTA CGATCGCGGG AGGCCTGTTG TCTGCCGGGT ACACGATGCC
GAGCTACTGA AAGGGGACAA CCCTCATGCG GCCGCCGGCG GGCCGGATCT TGTAGTAGGT
TTTGCGGAAG GGTACCGCGC CTCCTGGCAA ACCGCCATTG GTGGCATAAC CGGGGGCGAG
ATCATCGAGG ACAACCTGAA GAAATGGAGT GGCGACCACT GCTGCGACGC AAGCCTAGTC
CCAGGTGTTC TTTTCACAAA CGCCCCCACC ACCGGCTACA TGTCGTCCGT TAATGAAATC
GGGAACATGC TGGCGGAACT GACCCAAAGG TAG
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| Protein sequence | MSKTIFLGID GMDPKIAEQL MSAGQLPNFE RLAARGHYSQ LATINPPQSP VVWSTIATGL
APSGHGIYDF IHRDPATYKP YLSLHRIEHG RYVNPVQGET FWEKCAAKGI GSTLLKWPMG
FPPRPFPGQM LAGLGAPDLR GMLGTYTCYT SAPEKMERDA KGRIVPVPGS AQSVQTDITG
PFTVGLTGRK ATTIPLNIQL DANSVTCRIG RQSFTLAPGQ WSPWLTIVFD IGFFRTVKGI
CRFYLSGLHP EFSLYMTPVN VAFDSSEFPI SHPADYAVEL ADAIGPFSTL GLAEDTNAVN
DGALDEDGFI SLCDGIMAER ESMFLYELSR FREGLLACVF DTTDRIQHIF WRMHDTGHPM
HDPALAESYN DVIPRYYRWM DRILGVVLDR APDAALICCS DHGFCSFRRS VQVNDWLLRE
GFLALKPGAK LCEGLFEEID WSRSQAYAAG LNSIYLNLRG REKEGILNES ELPALKSKLA
ARLASLYDRG RPVVCRVHDA ELLKGDNPHA AAGGPDLVVG FAEGYRASWQ TAIGGITGGE
IIEDNLKKWS GDHCCDASLV PGVLFTNAPT TGYMSSVNEI GNMLAELTQR
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