Gene Gbem_1579 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_1579 
Symbol 
ID6781567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp1832102 
End bp1832860 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content64% 
IMG OID642767573 
Productbeta-lactamase domain protein 
Protein accessionYP_002138393 
Protein GI197117966 
COG category[R] General function prediction only 
COG ID[COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGATTAC GCGTACTAGG TTGTTCAGGT GCCGAATTCC CCGGACACAG TCCATCGGCT 
TTTCTGATCG ACGACTCTTT GCTCCTGGAC GCCGGGACCG TGGGTGCCGT GCTCAGCGAG
GACGAGCAGT GGCGCATCGA CGACATCCTG GTGACCCATT CGCACCTGGA CCATATCCGC
GGCATCCCGC TTCTGGCCGA TAACATCGTC GTCTCCCGAC TTTCCCGGAC CGTCCAGGTC
CGCGGCACGA CTGAAGTCCT CGCGGCTCTC GGCACCCACC TGATGAACGG CGTCATCTGG
CCCGATTTCA CCCGCATCCC CACGCCCGAG GCCCCGGTGC TGCGCTACCA GCCGATCCCG
GTAGATAAGT CCTTCGCGGT CGGCGATTAC GAGGTGCTGG CCTCCCCCGT GAACCATCCC
GTCCCTGCGG TCGGCTATCG GGTGAGCAGG GGGGGGACTT CGCTGCTCTA CACAGGCGAC
ACCGGCCCCA CCGAGCGCAT CTGGGAGTTG GCCGGGGAGT TGGCGGCGCT GATCGTCGAG
GTTTCCTTCC CGAGCGACAT GGCGGAGATA GCGCTTCTCA CCGGTCACCT GACGCCCATG
CTCCTGGGGA AGGAGCTGGC GAAACTGCCG AAACTCCCCC CGCGCATCCT GATTACCCAT
CTGAAACCGC AGTATTACGA CCGGATCGAG GCGGAGCTTG CGGCCCTGCG TCTTCCGGGG
GTCGAGCTTT TGCGCGGCGG AAACGTCTAT GACCTGTGA
 
Protein sequence
MRLRVLGCSG AEFPGHSPSA FLIDDSLLLD AGTVGAVLSE DEQWRIDDIL VTHSHLDHIR 
GIPLLADNIV VSRLSRTVQV RGTTEVLAAL GTHLMNGVIW PDFTRIPTPE APVLRYQPIP
VDKSFAVGDY EVLASPVNHP VPAVGYRVSR GGTSLLYTGD TGPTERIWEL AGELAALIVE
VSFPSDMAEI ALLTGHLTPM LLGKELAKLP KLPPRILITH LKPQYYDRIE AELAALRLPG
VELLRGGNVY DL