Gene Gbem_1556 details

Gene Information

• Locus tag: Gbem_1556
• Symbol: aroB
• ID: 6781544
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter bemidjiensis Bem
• Kingdom: Bacteria
• Replicon accession: NC_011146
• Strand: +
• Start bp: 1805977
• End bp: 1807065
• Gene Length: 1089 bp
• Protein Length: 362 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 642767550
• Product: 3-dehydroquinate synthase
• Protein accession: YP_002138370
• Protein GI: 197117943
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0337] 3-dehydroquinate synthetase
• TIGRFAM ID: [TIGR01357] 3-dehydroquinate synthase

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGATAGCTG AAAAGATCAG GGTCGCGCTT GACGAACGGA GTTACGACAT CGAAATGGGC 
GCCGGCAATC TCGACAGAAT CGGTTCCCTT TGCCGCGAAG TCGGCCTGTC CGGAACGGCG 
GCGGTGGTCA GCAACACCAC CGTGGCCCCG CTCTATTACG AAACTGTCAG GCTCTCCATG 
GAGCGCGCAG GGTACCGGGT GGTGCCGGTA ACTCTCCCGG ACGGTGAGGG GTACAAGAAC 
AGCGCTACGT TGAACCTGAT CTACGACGGC CTGGTAGACG CCTCGCTCGA CCGCGGCTCC 
TTCATCCTGG CCTTAGGCGG CGGGGTCATC GGCGACATGG CCGGGTTCGC CGCCGCAAGT 
TACCTGCGCG GCATCCCCTT CGTCCAAATT CCCACCACGC TTCTCTCCCA GGTCGACTCC 
AGTGTCGGCG GCAAGACCGG CATCAACCAT CCCCGCGGCA AGAACCTGAT CGGCGCCTTC 
TACCAGCCCA AAGCGGTCCT CATCGACGTC GCCACCCTCG ATACCCTCCC GAAAAGGGAG 
TTCCTGAGCG GTCTGGGAGA GATCGTCAAG TACGGTGCGG TGCTGGACGG CGGCTTTTTC 
GATTTCCTGG AAAAAAACGC GAAACTGCTA TTGGCCCGCG ACAAGGAGGC CCTGATCCAG 
GCGGTCAGCC GCAGCTGCGC CATCAAGGCG AAGGTCGTGG CGGAGGACGA ACGGGAAGGT 
GGGGTGCGCG CCGTGCTGAA CTACGGGCAC ACCCTGGGGC ACGCCGTGGA GACCCTCACC 
GGTTACACCC GCTACCTGCA CGGGGAGGCG GTCGCTATCG GCATGGTACA GGCTGCGCGG 
CTCTCCCAGC ACTACGGCTT CTGCTCCCAG GCGGATCGGG AGCGCATCGA GGCCCTGGTC 
GTGGCGCTGG GGCTGCCGAC AGAACTTCCT TCCTTCCCGC CTCAGCAGTA CAGGGAGGCG 
CTCTCGCACG ACAAGAAGGT ACGCGACAAG GGACTCTTGT TCATCTGCAA CCAGGGGATT 
GGTGCCTACC GCATGGAAAG GCTCACCGAC CTGGGGGCGC TTCTGGAGAT CTGTGGCATA 
GGAGAATGA 

 

Protein sequence

MIAEKIRVAL DERSYDIEMG AGNLDRIGSL CREVGLSGTA AVVSNTTVAP LYYETVRLSM 
ERAGYRVVPV TLPDGEGYKN SATLNLIYDG LVDASLDRGS FILALGGGVI GDMAGFAAAS 
YLRGIPFVQI PTTLLSQVDS SVGGKTGINH PRGKNLIGAF YQPKAVLIDV ATLDTLPKRE 
FLSGLGEIVK YGAVLDGGFF DFLEKNAKLL LARDKEALIQ AVSRSCAIKA KVVAEDEREG 
GVRAVLNYGH TLGHAVETLT GYTRYLHGEA VAIGMVQAAR LSQHYGFCSQ ADRERIEALV 
VALGLPTELP SFPPQQYREA LSHDKKVRDK GLLFICNQGI GAYRMERLTD LGALLEICGI 
GE