| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1537 |
|---|
| Symbol | |
|---|
| ID | 6781525 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | + |
|---|
| Start bp | 1786324 |
|---|
| End bp | 1786809 |
|---|
| Gene Length | 486 bp |
|---|
| Protein Length | 161 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642767531 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002138351 |
|---|
| Protein GI | 197117924 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
|---|
| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGGGAG AGCGAGGTTT TTCGCTGATC GAAATGGTGG TGGTGCTGGC CATCATCGGC
ACCCTGCTCG GCATTGGGAG CATGCAGTTC GGCCGCATGC AGAAAAAGTC GAGCATTGAG
CAGCAGACCA GGACCATCTA CGCCAAGATG ACCGAGATGC GCGTCGAGGC CCTCTACACT
AAGCAGGCGC GCACCTTGGT GCTCGGAGAC CGGAGGCTGA CAGTCTACGC GAGCTCCGAC
GGGAGCGGTC CTGCGCTTCA GGTGCAGCAA CTTCCGTTCG CAGCCACCAT GGGCGCCGAC
GACCGCGTCA GCTTCGAGGC CAGCGGCCTG ATGACAGGGG GCGACCGCGC CCTCTGCGTG
GAACCCGGTG GGGTGGCGGA GAACCCAGGA AATATCGACA GCGTCGTGGT GACCGCTGCC
AAGGCCTATA TGGGAAAAAG AAACTCGGGA GGAGCCTGTG TCCCAACACA AATTGTTGCC
AAATAA
|
|---|
| Protein sequence | MRGERGFSLI EMVVVLAIIG TLLGIGSMQF GRMQKKSSIE QQTRTIYAKM TEMRVEALYT
KQARTLVLGD RRLTVYASSD GSGPALQVQQ LPFAATMGAD DRVSFEASGL MTGGDRALCV
EPGGVAENPG NIDSVVVTAA KAYMGKRNSG GACVPTQIVA K
|
|---|
| |