| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1440 |
|---|
| Symbol | |
|---|
| ID | 6781427 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | - |
|---|
| Start bp | 1664246 |
|---|
| End bp | 1664710 |
|---|
| Gene Length | 465 bp |
|---|
| Protein Length | 154 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642767433 |
|---|
| Product | transcriptional regulator, BadM/Rrf2 family |
|---|
| Protein accession | YP_002138254 |
|---|
| Protein GI | 197117827 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1959] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCTAA ACAAGGCAAG CCTTTTCGCG CTTATCTCCG TCCTGGAACT GGCCAGAGAC
CCGGAGCGGC AGCTTTCCAC CTCGGACATC GCCGACAAGT ACGGCATTTC CTCGCACCAC
CTGGCCAAGG TGATGCGCAA CCTCGTGCAC CAGGGAGTGG TCCAGGCGAT GCGCGGCGTA
GGGGGCGGTT ACCGCTTCGC CGGCAACGTC AACCGCACCA CCTTGCTCGA CATCATCCAG
CTCTTCGAAA CGCTGGAGAG CGAACTGGAT CTCCCCCACT GGAACAAGGC GGCGGAGCCG
GTGGTCTCCG AGCTGCACAG CGTGACCAGC GAGATCGACA CCGTTACCCG CGCCATCCTC
GACACCGTCA CCCTGGCCAC GGTGCTGAAG AACACCAGGG CCACAGGCGA AGGTGCGGCG
GAGGCGAGCC CGCCGGGCAG GATCTCAAAA GCGGCTGCAG GTTGA
|
|---|
| Protein sequence | MKLNKASLFA LISVLELARD PERQLSTSDI ADKYGISSHH LAKVMRNLVH QGVVQAMRGV
GGGYRFAGNV NRTTLLDIIQ LFETLESELD LPHWNKAAEP VVSELHSVTS EIDTVTRAIL
DTVTLATVLK NTRATGEGAA EASPPGRISK AAAG
|
|---|
| |