| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1322 |
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| Symbol | |
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| ID | 6781309 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 1524120 |
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| End bp | 1526003 |
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| Gene Length | 1884 bp |
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| Protein Length | 627 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642767316 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_002138137 |
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| Protein GI | 197117710 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.993956 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCTACGA AAAAAGAAAA AATTCTGGAG AGTGCCCAAC GCTTCGTCCT TAAAGGGCAG
ATCGACAAGG CGATCAAGGA TTACCAGCAA GTGGTGGCCT TGGATCCCTC CGATGTCCGT
TACCGTCAAA GGCTGGCCGA ACTCCTGGTG CGGGACCGCC GCAAGGAAGA GGCGATCCAG
GAGTACGAGT TTATCGGCAA GCATTACGCT GAAAACTCCT ACTTCCTCAA GGCGATCGCC
ATCTATAAGC AGATACAGCG TCTTTCGCCG GGCAACACCG CGGTAGCGCT CACCGTCGCT
TCCCTGAACC ACCAACAGGG GCTGATCGGC AACGCGCTGG CCGAGTACGG TCAGGTGGCG
GCCCAGTTCG AAAAAGAAGG CGCCCTCAAA GAGGCGCTCA AGGTCGTGGA ACAGATGCTG
GGCGTGGATG CCGAACACTG CGCCACTCGC CTCAAACATG CCGAACTCCT CTTCGCTACC
GGTGCCAAGG ACGACTCCTA TTCGGCCTTT GAGCAACTGG CGGCATCGCT GCGCGCACGC
GGTCACTCAG CGGATGCGGA CGTGGTCGCC TTCCGCCTGC AGCAGCTTTT CCCCGGCAAG
CCGGGGGAAT CTTCCGCCGC TGCTCCACTG CAAATGGACG CCGCAACGCC GGGCGCCTTG
GAAGCGCTCG ATTGTGGCCG CGATATTCCC GGCGTGGCTG CTGACGTCCC GGCGCCCTGG
GAGAGCGGGG GGGAAGGGGA TGCCGGCGAA GAACTCCCCG ATCCTCTCGA TCCGCCCTTG
CCGGCAGTAG CCGCGGAACC GGCACCCCCC GTCGGCTCCT GGGAGCCGGA ACCGGCTGTC
GCCACCGCCG CTACCGACGA AGCTCCCGCG CTTGCCTCAT GGGAAGAGGA GATAGAGCTC
GACCTGGACG ACGATCTGCC GCTGGAGAGC GCCCCCGTGG CGTCCTCCGA TTTCCAGGCC
GCATCCCATG TGCCACACGC TCCCGTTTCT GAAGCGAAGC AGCCTGCCTT GCCGCCCGAG
GCGCAGGACG GGATCGACCT GCAGCTCGAT TTTTCCCTGG AACTCGACTT CGATGAAGTG
GTGCAGTCGC TGGAAGAGGA GCCGCTGGAC CAGGAGGCGG CCCCAGTGGT CGAGCTGGAT
ATCGACGCTG CGGCGTTGGA GCTGAGCCTG CCTCAGGAAC CGGGCGCGGA CCTCCCCTGG
GAAGAACAGC CGGAATCGGA TGAGCTTTCC GCGGCGGAAG ACCTGCCGGA ACTGGAAGAT
CTCCCTGAAC CGGAGCAACT TGCGGAAGCG GAGGAGCTGC CCCAAGTGCA AGCACCGGAG
CTTATGGAGG TGCAGGACTG GGAGGCCCCT ACGGAGGCGC CGCAGGACGA AGAGCCAGCT
CGGATGGACG CGGCGGCGCC CGCCCTCTCG CAGCGGTTGC GCGGGTGGGA GGAGATCTAT
CCGGAGAGCG GGGATGCTCC CGAGGCGGAG TTGGACATCG AGGAGCTGGA GTCGCACTAC
GATCTGGGGA TCGGCTATAA AGAGATGGGG ATGTGCGGCG GCGCCATCAA GGAGTTCGAC
ACCGCTGCGC GTAACCCTCA CCGGCGGCTG GACTGCCTTA CGCTGCAGGC CATCTGCTAC
CGTGAAAAGG GGGAGGCGGA CCGGGCCGAG GACTTGCTGC GTCGAGGCCT ATCCCTGGAG
GTGATCTCCC AGCCGGAGCG GGTCTGCATC GCCTACGAGC TGGCCGTGCT GCTGGAGGAT
TCGGGAACGC CGGACGAGGC GATAGAGCTG TACCGGGAGG TTGTTCGCGC CAACCCCGGG
TGCCATGACG CCTCTCGGAG GCTCTCCGCT CTTTCCGGGG AGGAGCGGCT GGACATCATC
GAACTGGAAC TGGAAGAAGG GTAG
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| Protein sequence | MATKKEKILE SAQRFVLKGQ IDKAIKDYQQ VVALDPSDVR YRQRLAELLV RDRRKEEAIQ
EYEFIGKHYA ENSYFLKAIA IYKQIQRLSP GNTAVALTVA SLNHQQGLIG NALAEYGQVA
AQFEKEGALK EALKVVEQML GVDAEHCATR LKHAELLFAT GAKDDSYSAF EQLAASLRAR
GHSADADVVA FRLQQLFPGK PGESSAAAPL QMDAATPGAL EALDCGRDIP GVAADVPAPW
ESGGEGDAGE ELPDPLDPPL PAVAAEPAPP VGSWEPEPAV ATAATDEAPA LASWEEEIEL
DLDDDLPLES APVASSDFQA ASHVPHAPVS EAKQPALPPE AQDGIDLQLD FSLELDFDEV
VQSLEEEPLD QEAAPVVELD IDAAALELSL PQEPGADLPW EEQPESDELS AAEDLPELED
LPEPEQLAEA EELPQVQAPE LMEVQDWEAP TEAPQDEEPA RMDAAAPALS QRLRGWEEIY
PESGDAPEAE LDIEELESHY DLGIGYKEMG MCGGAIKEFD TAARNPHRRL DCLTLQAICY
REKGEADRAE DLLRRGLSLE VISQPERVCI AYELAVLLED SGTPDEAIEL YREVVRANPG
CHDASRRLSA LSGEERLDII ELELEEG
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