Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_1321 |
Symbol | |
ID | 6781308 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 1522160 |
End bp | 1524058 |
Gene Length | 1899 bp |
Protein Length | 632 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642767315 |
Product | transglutaminase domain protein |
Protein accession | YP_002138136 |
Protein GI | 197117709 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGAAGC TAAAGATTGA AAAGCTGCTG AACCTTCTTG CCGGCTGCAT CGCGCTTCTG GGGTACCTAC CGCTGCAGCC GTACCTGGAT CCGCTCCCCC GTTACTTCTT TCCGGTCTCG CTCATGGGGG CGTTTTACCT GCAGCGTACC GGCCGCGCGC TGCCGGCGCG CCTGCTCACC CCCCTCTCCA TCGCGCTCTT TCTCTACTAC GCCATCGGCT TCAGCGTGAA TCGCCTGGTA CCTGTTACCG GGGACCTCCT GGTGCTCTTT CTGGCGGTGA GGCTCTTGGG CGAGAGAAGC GGCAGGCATT ACCTGCAGGC CTTCGCGCTG TCGCTCTTTT GCCTGGCCGC CTCGTCGCTT TACGAGATTT CCGCGATCTT CCTGCTTTAC CTGCTGCTGC TTTTGCTCCT CATGGCTGTT TCGCTGGTGC TGCTCACCTT CCATGCCCAC GACCCCGCCA TCGCCCTTGC CCCTGACCAG GGGAAGAAGG TGCTTGCCGT CTCGGTACTT ATGCCCGTGG CCTCGCTCCC CATCCTGCTC GTGCTCTTCG TGCTCTTGCC GAGGACGCAG TACCCCCTGT GGCATTTCCT GGACGCGACG GCAGGGAAAA AGACCGGGCT TTCCGACCGC GTCCAGCCTG GAGACGCGGC CAGCGTCACC GAGGTGAAAG GGGCGGTACT AAGGGCCATA ACCGGCAGGC TCCCGGAAGA CAAGCTTTAC TGGCGCGGGG TCGTGCTGAA CGGATTCCGC GGCGATTCGT GGGTGAGGCT TCCGGTCCCC GAGGAACTGC CACCGGTCCA AAGGGGCGGC GCGGTGCTAC AGGAGATCTA CCCGGAGCGT TCGCAGAGCT CCTACCTCCT CGCCCTGAAT ACCACCCGCA GCATCTCGGG GCTGCGCCAC GACGAGGCCA ACGACGCCGT CTTCACTTCC CGGCGGCCGC TGGACAGGAA GGTGAAGTAC GTAGCGACCT CGGTCCTAGG CACGCCCCTT GAGGTGAAGG GAGGGATAGA CCGCGATTTT TACCTGCAGC TTCCCGCGAC GCTCCCCGAG CGCATCCTGG CCAAGGGGCG GGAACTCGCC CGAGCCGGCC TCGGTCCCCC GGAGCGGATG CGGCTTTTGG AAGCATTCTT CCGCAACCAG AGGATCACCT ATGCCAACAC CGAGCTCCCG GTCGGCCCCC AGCCGCTGGA CTCGTTCCTC TTCGACAAAA GGCGGGGCAA CTGCGAATAC TTCGCCTCCT CTTACGCCAC GTTGCTAAGA GTAGCCGGCA TCCCGTCCCG GCTGGTCGGG GGGTACCGCG GCGGCACCTA CAACGACATG GGTGGGTACT ACCTGGTGAC CGAGGACATG GCGCACGTAT GGGTCGAAGC GTACCTCGAC GGGGTAGGGT GGCAGACGGT CGATCCCAGC GCCTGGGCGC TCGGGTCGGC AAGGCGTGCC GCCTCCGCCA GGGGAATCTC GATGTACTTC GATGCCATCA GCTTCTACTG GGACAAGGCT GTGGTAAGTT ACGACCTCGA CAAGCAGATC GCGCTGGTGA GGCGGGCCGG GAGCAAGGCG CGCGACCTGC GTCTCCCTGC GGGCTTCCTG CGCGGCTCGC TGGCGCTGTT GTTGCTCATG TTGCCGCTGG CGGCTTTTGG TTTGTGGCTC AAGAAGAGGC CGGCAAGCCA GGAGGAGAGG GTGCTGAGGC AGATGCTGCG GGCCGCGCGC AAGCGCTACC CGGGGGACGC GAGCGGGGAG GAAGGGCTCT TCGAGCTGTC GTCGCGCCTG GACGATCCCC TGATCCGCGA GTTCGCAGCC GTTTACGGCG GCGCCGTCTA CCGAGACAGG CCGCTGCGAA AGGAAGAGCT GGCGAGATTG AAGGAAATAG TCCGGGAACT GCGTCAGCAT GGTCCTTGA
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Protein sequence | MAKLKIEKLL NLLAGCIALL GYLPLQPYLD PLPRYFFPVS LMGAFYLQRT GRALPARLLT PLSIALFLYY AIGFSVNRLV PVTGDLLVLF LAVRLLGERS GRHYLQAFAL SLFCLAASSL YEISAIFLLY LLLLLLLMAV SLVLLTFHAH DPAIALAPDQ GKKVLAVSVL MPVASLPILL VLFVLLPRTQ YPLWHFLDAT AGKKTGLSDR VQPGDAASVT EVKGAVLRAI TGRLPEDKLY WRGVVLNGFR GDSWVRLPVP EELPPVQRGG AVLQEIYPER SQSSYLLALN TTRSISGLRH DEANDAVFTS RRPLDRKVKY VATSVLGTPL EVKGGIDRDF YLQLPATLPE RILAKGRELA RAGLGPPERM RLLEAFFRNQ RITYANTELP VGPQPLDSFL FDKRRGNCEY FASSYATLLR VAGIPSRLVG GYRGGTYNDM GGYYLVTEDM AHVWVEAYLD GVGWQTVDPS AWALGSARRA ASARGISMYF DAISFYWDKA VVSYDLDKQI ALVRRAGSKA RDLRLPAGFL RGSLALLLLM LPLAAFGLWL KKRPASQEER VLRQMLRAAR KRYPGDASGE EGLFELSSRL DDPLIREFAA VYGGAVYRDR PLRKEELARL KEIVRELRQH GP
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