Gene Gbem_1225 details

Gene Information

• Locus tag: Gbem_1225
• ID: 6781209
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter bemidjiensis Bem
• Kingdom: Bacteria
• Replicon accession: NC_011146
• Strand: +
• Start bp: 1419049
• End bp: 1419666
• Gene Length: 618 bp
• Protein Length: 205 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 642767216
• Product: Lysine exporter protein (LYSE/YGGA)
• Protein accession: YP_002138040
• Protein GI: 197117613
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1280] Putative threonine efflux protein

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTGGATT TTCTCACCGC GGGGCTCGTG CTAGGTCTTT CCGCCGGGTT CTCCCCCGGG 
CCGCTGCTCA TGCTGGTCAT CTCCGAAACG CTGCACCACG GGACCAGGTC CGGGGTGCGG 
GTCGCCCTGT CGCCCGTCGT CACCGACCTT CCCATCGTCC TCGCCACGCT GCTCCTTTTG 
GTCAAGGTCT CCGGCTACCA CGGCGTACTC GGGGGCGTAT CCCTGGCGGG AGGGCTCTTC 
GTCCTAGCCA CCGGATGGGA TTCCATCCGT ACCCGCCCCG TGCAGCTGGA TCTCCCCAAA 
GAACAGCCCA AGTCGCTAAG AAAAGGGGTG CTGACCAATT TCCTCAGTCC GCACCCCTAT 
CTGTTCTGGA TCACCGTCGG CGCGCCGCTT CTGACCAAAT CGCTCAACGT CGGCTGGACC 
GCGTTTTTCG CCTTCGTGCT GAGCTTCTAC CTGTCGCTTA TCGGGGCCAA GATCATCCTC 
GCCGTGGCGG TGGGAAGGTC GAAGGCATTT CTATCCGGCA GGCTCTACCT TTACACCATG 
CGTTTTCTCG GGGGGCTCCT CGTCCTCTTC GCGCTGCTCC TTTTCAAGGA GGGGCTGGTG 
CTTCTAGGGC TCATCTAG 

 

Protein sequence

MLDFLTAGLV LGLSAGFSPG PLLMLVISET LHHGTRSGVR VALSPVVTDL PIVLATLLLL 
VKVSGYHGVL GGVSLAGGLF VLATGWDSIR TRPVQLDLPK EQPKSLRKGV LTNFLSPHPY 
LFWITVGAPL LTKSLNVGWT AFFAFVLSFY LSLIGAKIIL AVAVGRSKAF LSGRLYLYTM 
RFLGGLLVLF ALLLFKEGLV LLGLI