| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1222 |
|---|
| Symbol | |
|---|
| ID | 6781206 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | + |
|---|
| Start bp | 1416378 |
|---|
| End bp | 1417079 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642767213 |
|---|
| Product | aspartate racemase |
|---|
| Protein accession | YP_002138037 |
|---|
| Protein GI | 197117610 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1794] Aspartate racemase |
|---|
| TIGRFAM ID | [TIGR00035] aspartate racemase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACCA TTGGCATGAT TGGCGGCCTG GGCCCGGAAG CTACGCTTGA TTACTACAAG
CGCATCATCG AAGCCTCAAG GGGAGCCGGA ACCCTCGATA CCCCGGAGAT CATCATCTAC
AGCGTAAGCC TCCAGGAGGT GCTGGACCTG GCGGCCCGGC GCGAGTGGAG TAACCTCATC
TACCTCCTGA CGGCGAAGGT TAAGGCTCTG CAGAAAGCCG GGGCCGATTT CGCCTTCATC
TCCGCCAACA CCCCGCACGT CGTCTTCGAC GAAGTCCAGG CGAAATCCCC CATCCCGCTT
ATCAGCATCG TCACCGCGAC CCTGGAAAAG GCGAAGGAGC TGGGGGTGAA GCGGGTAGGC
CTCTTGGGAA CGAAGTTCAC CATGGAGGAG AACTTTTTCG CGGCGCCGTT CTCGGCCGCC
GGCATCTCCG TGGTGATCCC GCAGCCAGCC GACCAGCAGT ACATCCAGGA GAAGCTGATG
ACCGAGATCG AACTGGGGGT CTTCAAGGAC GAGACCCGAG ACGGCCTCCT GGCGGTGATC
GGGCGCATGA AGGAGCAGGA GCATATAGAT GCCGTCATCC TCGGCTGCAC GGAGTTGCCG
CTGATACTGC TGAAGGACGA ATTCGGGATA CCTTTTTTGA ACACGACGGC GATTCACGTG
GAAAGCGTGG TGGAGTACGC GAGGAAGGAG CAGAGATGGT AG
|
|---|
| Protein sequence | MKTIGMIGGL GPEATLDYYK RIIEASRGAG TLDTPEIIIY SVSLQEVLDL AARREWSNLI
YLLTAKVKAL QKAGADFAFI SANTPHVVFD EVQAKSPIPL ISIVTATLEK AKELGVKRVG
LLGTKFTMEE NFFAAPFSAA GISVVIPQPA DQQYIQEKLM TEIELGVFKD ETRDGLLAVI
GRMKEQEHID AVILGCTELP LILLKDEFGI PFLNTTAIHV ESVVEYARKE QRW
|
|---|
| |