Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_1221 |
Symbol | |
ID | 6781205 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 1414186 |
End bp | 1416381 |
Gene Length | 2196 bp |
Protein Length | 731 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642767212 |
Product | helicase, RecD/TraA family |
Protein accession | YP_002138036 |
Protein GI | 197117609 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
TIGRFAM ID | [TIGR01448] helicase, putative, RecD/TraA family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGAGA CACCCCCAAC AGAAAACGTC GACAGGCTCT CCGGATCGCT GGAGCGCGTC ACCTTTCACA GCGAGGAGAC CGGGTTTTGC GTGCTGCGGG TGAAGGTTGC CGGGCAGCGC GACCTGGTGA CGGTGACGGG CGCCGCGGCC TCGGTTACGC CGGGGGAGTA CCTTGAGTGC ACCGGCTCCT GGCACAACGA CCGGACCCAC GGCATGCAGT TCAAGGCCGG GCACATCAAG GTGGTTCCCC CCACCACGCT GGAAGGGATC GAGAAGTACC TGGGTAGCGG CATGGTGCAC GGCATCGGGG CCCACTTCGC CAAGGTGCTG GTGAAATCGT TCGGCGCGGC GGTCTTCGAC GTCATAGAGA ACCACCCGGA GAGGCTCCTG GAACTCCCGG GGATCGGCCG CAAGCGGATG GAATCGGTCG CCGGCGCCTG GGTGGAGCAG AAGGCGATCC GGGACATCAT GGTGTTCCTG CAGTCCAATG GCCTTGGAAC CGCCCGCGCC GTGAGGATCT ACAAGAGCTA CGGCAACGAA GCGATCTTCA AGGTGACCGA AAACCCGTAC CGGCTGGCCC TGGAGATCCA TGGCATAGGT TTCAAGACTG CCGACCTCCT GGCTGCCAAG CTGGGGATAG CGCCCGATTC CATGATCCGG GCCCAGGCGG GGGTGCGGCA CGTGCTGCAG GAGATGTCGG CCGGCGGGCA CTGCGCCAGC CTGCGGGCGG AACTGGCCGA GAGCGCAGCT ACTCTGCTGG AGATCCCTCA ACCGGTAATC GAATCCGCCA TCGAGGCGGA ACTCGCCGAG GAGAACCTGG TCGCCGACCA GATCTCCGGC TCCCCCTGCG TCTTCCTGGC GCCGCTCTAC AAGGCGGAGG TAGGCGTAGC CTCCGGCATT TGCCGGCTTC GCGCCGGCAC GCCCCCTTGG GGCGGCATCG TCGCCGAAGA GGCGATCCCG TGGGTGGAGA GCCAAAAAGG AATCACCCTT TCCGCCTCGC AGCGCGATGC GATTCGGCTC GCGCTTAAGA GCAAGGTGGT CGTGGTGACC GGCGGACCGG GGGTGGGTAA GACCACGCTG GTCAACAGCA TCCTGGGTGT CATCGGCAGA AGGCCGCTCC GGGTCACCCT CTGCGCGCCG ACGGGGAGGG CAGCCAAGCG CCTCGCCGAA TCGACCGGGA TGGAGGCGAA GACCATCCAT CGGCTCTTGG AGTTCGACCC GCAGACCTTC GGCTTCAAGC GCTGCAAGGA GAACCCGCTT CACACCGACC TCCTGGTCAT GGACGAGGCG TCCATGGTCG ACGTCGTGTT GATGAACAAG CTCCTTCCCG CCATTCCCGA CCATGCCGGC CTCATCATCG TGGGGGACGT GGACCAGCTC CCCTCGGTGG GGCCAGGCTG CGTCCTCTCC GACATCATCG AGTCCGGCGC GGTTCCGACG GTACGGCTCA CCGAGATCTT CCGGCAGGCC GCAGGCTCCA GGATCATCGT CAACGCCCAC CGCATCAACC GGGGTGAGCT GCCGCTGAAG GACGAGGGGA AGGAGCTCGC CGACTTCTAC TTCATCCCGG CGGCGACGCC CGAGGATATC CACGACAAGC TCCTGCAGGT GGTCAGGGAG CGGATACCCA AGCGCTTCGG CTTCGATCCG GTGCGCGAGG TCCAGGTGCT TACGCCGATG AACCGCGGGG GGCTCGGGAC CAGGTCCCTC AACGCCGAGT TGCAGGGGGT GCTGAACGGC AGGGCCGAGC CGAAGGTGGA GCGCTTCGGC ACCAGCTACG CCCCCGGGGA CAAGGTGATC CAGACGGTGA ACAACTACGA GAAGGAGGTC TTCAACGGGG ACATCGGACG CATAGTCGAG ATCCGCTCCG AAGAAAGCGC CCTCATCGTG GACTTCGATG ACCGGCTGGT GGAATATGCA TTCGCCGAAC TGGACGAGGT GAGCCTTGCC TACGCCACCA GCATCCACAA GAGCCAGGGG TCCGAGTACA CGGCCGTGGT GATCCCGCTT GCCATGCAGC ACTACACCAT GCTGGAGCGA AACCTCCTGT ACACCGCCGT CACCCGCGGC AAGAAGCTCG TGGTGGTGAT CGGCGAGCAG AAGGCGCTCG CCATGGCGGT GCAAAACCAG AAGTCCCACC GCCGCCTGAC CAAGCTGGCG GGGAGGATCG GACAGAAAGG AGACGGGATA ACATGA
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Protein sequence | MKETPPTENV DRLSGSLERV TFHSEETGFC VLRVKVAGQR DLVTVTGAAA SVTPGEYLEC TGSWHNDRTH GMQFKAGHIK VVPPTTLEGI EKYLGSGMVH GIGAHFAKVL VKSFGAAVFD VIENHPERLL ELPGIGRKRM ESVAGAWVEQ KAIRDIMVFL QSNGLGTARA VRIYKSYGNE AIFKVTENPY RLALEIHGIG FKTADLLAAK LGIAPDSMIR AQAGVRHVLQ EMSAGGHCAS LRAELAESAA TLLEIPQPVI ESAIEAELAE ENLVADQISG SPCVFLAPLY KAEVGVASGI CRLRAGTPPW GGIVAEEAIP WVESQKGITL SASQRDAIRL ALKSKVVVVT GGPGVGKTTL VNSILGVIGR RPLRVTLCAP TGRAAKRLAE STGMEAKTIH RLLEFDPQTF GFKRCKENPL HTDLLVMDEA SMVDVVLMNK LLPAIPDHAG LIIVGDVDQL PSVGPGCVLS DIIESGAVPT VRLTEIFRQA AGSRIIVNAH RINRGELPLK DEGKELADFY FIPAATPEDI HDKLLQVVRE RIPKRFGFDP VREVQVLTPM NRGGLGTRSL NAELQGVLNG RAEPKVERFG TSYAPGDKVI QTVNNYEKEV FNGDIGRIVE IRSEESALIV DFDDRLVEYA FAELDEVSLA YATSIHKSQG SEYTAVVIPL AMQHYTMLER NLLYTAVTRG KKLVVVIGEQ KALAMAVQNQ KSHRRLTKLA GRIGQKGDGI T
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