| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1217 |
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| Symbol | |
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| ID | 6781201 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 1409080 |
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| End bp | 1410690 |
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| Gene Length | 1611 bp |
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| Protein Length | 536 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642767208 |
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| Product | Peptidoglycan-binding domain 1 protein |
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| Protein accession | YP_002138032 |
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| Protein GI | 197117605 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3267] Type II secretory pathway, component ExeA (predicted ATPase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACTGGG AATCTTTCGG CTTCAAAGAG GCGCCTTTCG CGCTTACCCC CAACCCCTCG
TTCCTGTTCC TAAGTTCTCC GCACCAGGAG GCGTTCGCGC ACCTGCTCTT CGCCATCGAG
AGCCGGGCCG GTTTCATCGA GCTTTCGGGC GAGGTGGGTA CCGGCAAGAC GACCATCGTG
CGCACGCTGT TGAACCAGCT CGACCCGGAG ACCCACCGCA CCGCGCTCAT CTTCAACCCG
ACGCTTTCGC CACTGGGGCT TTTGCAGGAG GTCAACTCGG AGTTCGGGCT CGACTGCGTG
AGCCACGACA TGCGCGAGCT GCACACCACC CTGAACGCCT ATCTGCTGGA GGAGAACCGC
GCCGGCCGCA CCGTGGTGCT GGTGATCGAC GAGGCGCAGA ACCTCTCGGT AGAGGTGCTG
GAGCAGGTCC GGCTCATCTC CAACCTGGAG ACGGACAGCG ACAAACTGAT CCAGATCGTG
CTGGTGGGGC AGCCGGAATT GAACGCGCTC CTGTCGCGGG AGGAACTGAG GCAGCTGGAC
CAGCGCATCA CGGTGCGCTA CCACCTGAAG CCCATGTCTT TCGACGATAC CTGCGCCTAT
GTCCGGCACC GGATCCGGTT CGCCGCCGAC GGGCGGGAAC CGCTTACCTT CTCGCAGGGC
GCATTCAAGA AGATCTTCAG CTTCTCCGGC GGTTTGCCGC GCCTCATCAA CGGGGTCTGC
GACCGTGCCC TGCTGCTCGC CTACACCAAG GAGTGCAAGG AGGTTTCAAC CGAAATGGCG
GCTCTTGCCA TAGCCGATCT GCGCAGGTCG CTGCCCCGCA GGCGGCGTGC CGTACCGATG
AAGGCCCTGT CTGCCGGGGT GGCGCTCTGC ATCCTGGCGA TTGCCGCCTT CTCGATATTC
TCCGGGTCGC TGCTACGCCA GAAACCTGCC GCCTTGCACC CCCCTCCCGC ACTGTCGCGC
GAAGCGGCGC TCGCAGGGCT TGCTGCCTCC TCCGAACAGC AGAACCTGCT CGCCTCTGTC
AACGCGGTGC TGGCGGCGTG GCAGGCCCCG GCGGCTGTTG CCACCACGGG GCAGCCGGCG
ACGCTGCGCG GGCTTGCCCG CCAGCGCGGG ATGACGGCGA CGAAAGTGAC CGGGAACCTC
GACACGCTGG CGCGCCTGGA CGCCCCGGCG CTGCTCCATG TAGCCGTTCC GGGGGGAGGC
GAGAGGCTCA TAGCCCTCTT GAAGGTCGAC CGTGACGAGG TCGGCGTGGC GCCGGCCGTG
GCGGGAAAAG ATAGGCTCAC CAAAGCGGAG CTCGCGCAGA TCTGGAGCGG CGGCGCCACC
TTGCTCTGGA AGGATTTCCA TGGCATCTCC TCGCGCGGCA AAGCTAGTGA GAAGGCGGCC
GGGGTGAAAC TGCTGCAGGG GCTCTTGAAA CAAGTCGGCT GCTACGACGG CGCCGTTAAC
GGAGAACTCA GCGACAAGAC CCAGGCGGCT GTCGCCGAAT TCCAGCGCCG GGAGCAGTTG
ACCGCGGACG GGAAGCTGGG GGGGCAGACC CTGATGATGC TGTATCGGCG CGCCGGAGGT
TTTTTCCCGC CGGGGCTGCA AACCTTGACC CACAACCAGG GGCGAATCTA G
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| Protein sequence | MYWESFGFKE APFALTPNPS FLFLSSPHQE AFAHLLFAIE SRAGFIELSG EVGTGKTTIV
RTLLNQLDPE THRTALIFNP TLSPLGLLQE VNSEFGLDCV SHDMRELHTT LNAYLLEENR
AGRTVVLVID EAQNLSVEVL EQVRLISNLE TDSDKLIQIV LVGQPELNAL LSREELRQLD
QRITVRYHLK PMSFDDTCAY VRHRIRFAAD GREPLTFSQG AFKKIFSFSG GLPRLINGVC
DRALLLAYTK ECKEVSTEMA ALAIADLRRS LPRRRRAVPM KALSAGVALC ILAIAAFSIF
SGSLLRQKPA ALHPPPALSR EAALAGLAAS SEQQNLLASV NAVLAAWQAP AAVATTGQPA
TLRGLARQRG MTATKVTGNL DTLARLDAPA LLHVAVPGGG ERLIALLKVD RDEVGVAPAV
AGKDRLTKAE LAQIWSGGAT LLWKDFHGIS SRGKASEKAA GVKLLQGLLK QVGCYDGAVN
GELSDKTQAA VAEFQRREQL TADGKLGGQT LMMLYRRAGG FFPPGLQTLT HNQGRI
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