| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1126 |
|---|
| Symbol | |
|---|
| ID | 6781104 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | + |
|---|
| Start bp | 1303897 |
|---|
| End bp | 1304805 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642767112 |
|---|
| Product | NHL repeat containing protein |
|---|
| Protein accession | YP_002137942 |
|---|
| Protein GI | 197117515 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.330169 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGAGCCT TGATATACGC CAACCTTCTG CTTCTGGTCC TGCTGGTGCC GGTCCAGTCT
TTTGCCGCTG GGTCACTTAA GCTCCGGTTC CTTACCACCA TCAGCGCCGA TGACAAGGAG
GGGCTCATCA AGAGCCCCGA GGGTGTCGCC TGCAACGACC AGTCGGATGT CGTGGTCGCC
GATACAGGCA ACGGACGGCT TCTGCGTTAC ACCTTTCAGG ACAGGGCCCT CAAGGGGGGG
CAGGAGATTA AACTCTCCCA GGTGCAGTTT CCAGTTAAAG TGCAGTTCGG CGCAAAGAAC
GACATCTTTG TCCTTGACGG CAAGCAACAG AAGGTTGCAC ACCTCAACCC TGATGGCAGC
TTCGCCGGTT TCGTTACCCC CTATGGCGTG ACTAACCCGG ATAAGTACGT CATCAAGAGC
TTCAAGGTGG ACGGCGCTAA CAATATCTAC CTTCTTGACA TAGGCGGCGA GCGCGTGCTG
CATGTGGCCA TGGACGGTAA ACTTCTTGGA CAGATACCGT TCCCTGCCGG ATTTGGTTTT
ATCACCGACC TTGCCGTGAC TCCAGGCGCT GATGTGATTT TGCTCGATTC CGTAGGCTCC
AGACTGTACG TGGCGAAAAA GGACGCGACG CAGTTCACGC CGCTCACTAA GGACCTGCGT
GCGTACATGA ATTTCGCCAG CTACTTGACC ACCGCGAGCC GGGGGGGGGA ACTGTACCTG
CTGGATCAGG ATGGCGGCGC AGTCGTGACC ATAGGCCCAG ATGGCAGCTT TCAGGGACGC
CAGTTGGGTT TGGGCTGGAA AGCCGGCCAG TTGTACTACC CTACCCAGGT TTGCTTTGAC
AAAAGCGGTA ATGTCTTTAT CGCAGATCGT GGGAATTCCC GGGTGCAGAT CTTCGAAAGC
TTCAAATAG
|
|---|
| Protein sequence | MRALIYANLL LLVLLVPVQS FAAGSLKLRF LTTISADDKE GLIKSPEGVA CNDQSDVVVA
DTGNGRLLRY TFQDRALKGG QEIKLSQVQF PVKVQFGAKN DIFVLDGKQQ KVAHLNPDGS
FAGFVTPYGV TNPDKYVIKS FKVDGANNIY LLDIGGERVL HVAMDGKLLG QIPFPAGFGF
ITDLAVTPGA DVILLDSVGS RLYVAKKDAT QFTPLTKDLR AYMNFASYLT TASRGGELYL
LDQDGGAVVT IGPDGSFQGR QLGLGWKAGQ LYYPTQVCFD KSGNVFIADR GNSRVQIFES
FK
|
|---|
| |