| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1123 |
|---|
| Symbol | |
|---|
| ID | 6781101 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | + |
|---|
| Start bp | 1298730 |
|---|
| End bp | 1300571 |
|---|
| Gene Length | 1842 bp |
|---|
| Protein Length | 613 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 642767109 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002137939 |
|---|
| Protein GI | 197117512 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000290136 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCTA AGTTACTTAC TACTGGAACC GTTGCAATTA TGGCCGGAAT GGTGCTGTGC
ATGGAGGTCC GGGGCTTCGC CTCGGAGCAG CTTGCACCTC AAGCAGTAGT GCAGGCGGTT
CAAGCGCCCG CAGCAAAGGG GATCACCCCG GAAGCTGACA AAACAAGTAC GGCTAAAACC
GAAGCGGCTG GCGTATCCAG CCAGCCGGTT AGCGACCAGG CCCGGGCCGA GGGAGTCTAC
CTTCACTTGA AAGCGCCGTT ATACTCCCCG CTGTTCTTCG ATGTGCCCCT TGCCTCGGTG
AATGACGAGA AAATCACCCT CGGCGATCTG CAAAAGGCCC TGATGTCTTT GCATGAAAAG
ATGACTGAGG AGAAGGAAGT CTCCGCGAAG AAAAACTTCA TGGAGCCGCT GGAGCGCCTG
ATCAACGTCA AACTCGTGGT GCAGGAAGCG AAAAACATGG AGCTCGACCG GCAGGATGAA
ATAAAGAGCA ACCTGGAAAA ATTCGCCGAT CAACAACTGA GGCAGGTTCT TTTCCTCGAA
AGAGTGAAGG ACATCAAGCC GGACGAGAGG AAGGTCCAAA AGGAATACCG CGACACGATA
AAGGAAATGA AGCTTAAAAG CTTGATATTC AAGAAAGACA CCGTCGCTAA GGCCTTCATC
GAGGAACTGA AGCACGGCAA GAAGTTTGAC GAGCTGCGTG ACAAGGCCCT GAAAGATGGA
AAGGCGGAAA CGGCCGGACA GGACGAACAG CAGTATGCCA CCAACGCCGC TCTGGGGCCC
GTCGTCAGTG CCGGGTTGGC CGACGTTAAG GCCGGGGGGA TCAGCCCTAT CATCGAAATA
ATGAACGGCT TCCTCGTCGC CAAGGTCGAA GAGATCCGCT ATGTCGACAA CCCTGCCGGG
CTGGAGCAGG CGCGCAGCAA GGTGCTCAGC CAGATGAAGC TCGATAGCCT GAAGGCATAT
AAAGCCGAAC TCGTCAAGAA GTACGCCAAG GAAAACACCA AGCTGGTGAA GTCCCTAGAC
TTCGAGGCAA AAAAACCGGG GTTCGAGAAA CTCCTTACCG ACAAACGGGT GGTGATGTCC
ATCAAAGGGG AGGAACCGAT TCGCGTCAGC GACCTGGCTG AAGCTCTGAA CTCCAAGTTT
TTCCACGGCA TAGACAATGC GATTAAGGAG AAGAAGCTCA ACCGGGAGAA ACTGCTGGCG
CTCGACGAAC TCGAGTCGGT ACGGGTTTTC AAGAAGGCCG CCCTGGAAAA AGGGCTGGAC
AAGTCTGAAG AGTACCTGAA GAGGATAGAG GACCACAAGA CTACGGTGCT GTTTGGCGCC
TTCATCGAAA AAGTTATCAA GCCTGACGTG ACCTTCACCG TGGCCGAGAT CAAGGATTAT
TACGAAAAGC ATATCTCCGA GTACGCTGCC CCGGAAAAGA TGCAGATCCA AGGGATCGCC
TTCACCAAGA AGGATGATGC ACAGAAAGCG ATCGACAAGT TGAGGGAGGG GGTGGATTTC
GCCTGGCTAA GAAACAATGC GGATGGCCAG GTTGCCAAGA ACGCACGCGA CCTGCTCCAG
TTTAACGAGG AGGCCCTGAC GCTGCAGAGC ATGCCGGAGC CGATGCAGAA GGTTTTGAAA
GATGCCCACA AAGGAGACTA CAGACTGTAT GAAAGCCCGG AAGGGTACTC CTATGCGCTG
TTTGTAAAAG AGAAAGAAGA GGCGAAAGCG CGTCCTTTGG AAGAGGTGAA AGATGAAGTC
GGCCAGAAGG TTGCCTGGCT GAACCTGACG CAGGATATAG AGAAATGGTT CAAGAAGCTG
AGGGAAGCCT ATCCCGTGAA GATTTATCTT GAATCGCGGT AA
|
|---|
| Protein sequence | MKAKLLTTGT VAIMAGMVLC MEVRGFASEQ LAPQAVVQAV QAPAAKGITP EADKTSTAKT
EAAGVSSQPV SDQARAEGVY LHLKAPLYSP LFFDVPLASV NDEKITLGDL QKALMSLHEK
MTEEKEVSAK KNFMEPLERL INVKLVVQEA KNMELDRQDE IKSNLEKFAD QQLRQVLFLE
RVKDIKPDER KVQKEYRDTI KEMKLKSLIF KKDTVAKAFI EELKHGKKFD ELRDKALKDG
KAETAGQDEQ QYATNAALGP VVSAGLADVK AGGISPIIEI MNGFLVAKVE EIRYVDNPAG
LEQARSKVLS QMKLDSLKAY KAELVKKYAK ENTKLVKSLD FEAKKPGFEK LLTDKRVVMS
IKGEEPIRVS DLAEALNSKF FHGIDNAIKE KKLNREKLLA LDELESVRVF KKAALEKGLD
KSEEYLKRIE DHKTTVLFGA FIEKVIKPDV TFTVAEIKDY YEKHISEYAA PEKMQIQGIA
FTKKDDAQKA IDKLREGVDF AWLRNNADGQ VAKNARDLLQ FNEEALTLQS MPEPMQKVLK
DAHKGDYRLY ESPEGYSYAL FVKEKEEAKA RPLEEVKDEV GQKVAWLNLT QDIEKWFKKL
REAYPVKIYL ESR
|
|---|
| |