| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1082 |
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| Symbol | |
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| ID | 6781060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 1258304 |
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| End bp | 1259884 |
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| Gene Length | 1581 bp |
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| Protein Length | 526 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642767068 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_002137898 |
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| Protein GI | 197117471 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGCCCG CGGTACACAA CCTCTTGGAA AACAGCGCAA GAATTCGCCC CGACAAGGTC
GCACTGGTGC AAGGGGACCT GCGCATAACC TACCGCCAGG CGAACACCCG TGCCAACCGG
GTTGCCGGCT GGCTCATAGA TGAAGGTGTA CTTCCCGGCG AGCGAGTGGT GCTGCTGCTT
AAAAACGGCA TCGAGTACCT TGCGGGTTAC TACGGGATTC TCAAGGCAGG GGCAGTCGCG
GTGCCGCTCA ACTGCGATCT GCGGGTTGAT GCGCTTCGTG AGCTCCTGGC CGACCTGCAC
GCCGTAGCCG TGATCTGCGG CAGTGAAGGC GAACAACTCT TGAATGGGAT CGACAGCGAC
CTCTTCGGGA TTCGCCTCCT GCTGATCAAG GACGCGAGCG GCTCCCGTAC ACCCCGAGGC
GCCAGGGTGT TTGCCTGGGA CGAGGTAGTG ACCGACGCCG ATCTTCCCGA TCACGGCCTA
GCCACCAACG CCTCCGCCCT CGCCGGGATC ATCTACACCT CCGGGTCGAC CGGCGCCCCG
AAAGGGGTCA TGCTCTCCCA CCGCAACATC GTGAGCAACA CCTGCTCCAT CATCCAGTAC
CTCGGGTTGA ACGAGAACGA CGTCCAGATG GTGGTGCTCC CCTTTTTCTA CGTGATGGGG
AAATCGCTTC TGAACACGCA CGTGGCGGTG GGCGGAACCG TGGTCGTCAA CAACGCGTTC
GCCTACAGCG CGCCGGTGAT AAGGCAGATG GCGCAGGAGG GAGTCACCGG CTTTTCGGGG
GTCCCTTCCA CCTACGCTTA CCTGTTGCAC CGGTCGCCAT TGGCGGCTTT CCGGGACAAG
CTTCCGGCGC TGCGCTACTG CACCCAGGCC GGAGGGCACA TGGCGCGTGA GATCAAGCAG
AGGCTTATGG AGGTGCTCCC GCCGCACACA AGGCTCTACA TCATGTACGG CGCCACCGAG
GCGGCTGCCC GGCTCACCTA TGTCGAGCCG GAAATGCTTG TTGAGAAAAT CGATTCCATC
GGCAGGGCTA TTCCAGGAGT AACCGTCCGG GTCCTGGACG AGAAGGGGGA AGAAGTCGCC
GAGGGGGAGA TCGGCGAACT GGTGGCCTCC GGGGCGAACA TCATGCTGGG GTACTGGAGG
GACGAGATTG CCACCGGGAG GGTTCTTGAC GCCAACGGCT ACCACACCGG CGACATGGGG
TACCGCGACG GGGACGGCTA CCTCTACGTG ACCGGCAGAA AGGACCATCT GCTCAAGGTG
GGAGGGCACC GCCTCGACCC CCAGGAGATT GAGGACGCGC TGATGGCGAC GGGGGAGCTC
CTTGAGGTGG CGGTACTGGG CGTGGACGAC CACCTGTTGG GGAAAAAACT CGTGGCGATC
GCGGTGTCGC TCCAGGAAAA CCCAAGCGAC AAGGTGCTCC TCTCCCGCTG TCTGTCCAGG
CTCCCACGGC ACAAGATCCC CTCCGAGATC AGGTTCGTCG CGGCGCTGCC CAAATACGCC
AGCGGCAAGA TTGACCGCGC CGCCTGTTTA GAGGCGCCAC CCCTGGCCGG CCCATGTTGT
AGCGGCCGCC AGGGAGACTG A
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| Protein sequence | MEPAVHNLLE NSARIRPDKV ALVQGDLRIT YRQANTRANR VAGWLIDEGV LPGERVVLLL
KNGIEYLAGY YGILKAGAVA VPLNCDLRVD ALRELLADLH AVAVICGSEG EQLLNGIDSD
LFGIRLLLIK DASGSRTPRG ARVFAWDEVV TDADLPDHGL ATNASALAGI IYTSGSTGAP
KGVMLSHRNI VSNTCSIIQY LGLNENDVQM VVLPFFYVMG KSLLNTHVAV GGTVVVNNAF
AYSAPVIRQM AQEGVTGFSG VPSTYAYLLH RSPLAAFRDK LPALRYCTQA GGHMAREIKQ
RLMEVLPPHT RLYIMYGATE AAARLTYVEP EMLVEKIDSI GRAIPGVTVR VLDEKGEEVA
EGEIGELVAS GANIMLGYWR DEIATGRVLD ANGYHTGDMG YRDGDGYLYV TGRKDHLLKV
GGHRLDPQEI EDALMATGEL LEVAVLGVDD HLLGKKLVAI AVSLQENPSD KVLLSRCLSR
LPRHKIPSEI RFVAALPKYA SGKIDRAACL EAPPLAGPCC SGRQGD
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