| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0899 |
|---|
| Symbol | |
|---|
| ID | 6783736 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | - |
|---|
| Start bp | 1053753 |
|---|
| End bp | 1056938 |
|---|
| Gene Length | 3186 bp |
|---|
| Protein Length | 1061 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642766871 |
|---|
| Product | AsmA family protein |
|---|
| Protein accession | YP_002137716 |
|---|
| Protein GI | 197117289 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3164] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00548137 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTGCTGA AAAAAATACG AAGCTGGCTC TTGCCGGCTC TGGCCACCAT ACTCACCGTG
ATAGTTCTCG CCGCGGCGCT CCTGCCTAGG CTCCTGGACC TCGATACTTA TAAGCAGGAG
ATCCTGGCGC AGGTGAAGAG CTCCCTGAAA CGGGACCTGC AGTACCAGAC GGGAGAGTTC
TCCCTCCGCC TCACCCCCGC CTTCACCTTC ACCGGCGTCA CCGTGAAGGA AAAGGACGGA
TCCAGCGACT TCATCACCGC GGACCGGCTC ACGGTACGCA TCGCGATCCT CCCGCTTTTG
CGCAAGAAAC TCGTCGTGTC GCGGCTGCAA CTGGAGCGCC CGGCGATGAG AATCGTGCGC
GACCGCCAGG GGACCTTCAA CATCGCCGAC CTCCTCACCC CCTCTGCCGG CGGGGAAGCC
CCCGGGATCA GGGGGCTGGA ACTGAAGAAG GGGCATATCC GCTTCACCGA TTTCGCCTTC
TCGGAAAAGC CCGTAGTCAC CGAACTCTCC AATGCCGATC TCTTCCTTAG CCGCCTGGTG
CGTGGCAAGA GCTGCGATTT CAAGCTCGCC GCGGCGCTTG GTTCGCCAAA AGGCCCGGTC
CCGGTTTCCC TCTCCGGTTC CGCGAAGATC CCGGAGGCCG GGACGCCCTT CTCCGGCATG
GAGGTGAACG GCAAGGTCGC TACCGGCCCG CTGGACGCCG GGCACTTCTG GCCTTACTAC
AGCAAATGGG TCCCCTTCAA AAGCCTCGCC GGCGAACTGG CGCTCGACGC CTCCTTCAAG
GGACGGCTGA ACGCCTTCAA GAGCAAGGCG GAGTTCCGGA TCACCCGGCT CAACCTCGAC
TACCCGCAGG TGTTCCACGC AAGGCTCACC CCGAGGCTTT TGAAGGGATC CTGCGCGCTC
ACCCTCACCG CCAACCAGCT CGACATCGAA CACGTCAAGG TCGACCTGGA CGGGTTCAAG
GTAAACGGCG GGGTGCGCCT TTCCGACATC CACTCTGGGG ACCTGCGCAT CACCGCCAAC
GCGTCCAGCA ACAGCTTCAA CCTGCGCGAC TTCCACCAGT ACATCCCCTA CGGCATCATC
GTCGACGACA CCTCGCACTT CATCGAGCAG AAGATCAAGG GGGGAGTTTA CCGGCTGGAG
CAGGGGCACC TGGACGGCAG GGTGAGCCAG ATCCTGCACA TGGAGCGGGG ACAGAACTAC
AACGTGCTCG CGATAAAGGC TCATGTGCAG GAAGGTGTGG TGGATTACGG CTCCGGCATC
CCCGTATTCA GCGGGATCCG CGGCGAGTTG CAGCTAGCCG GCAAGGACTT CCTTTTAAAG
GGGATGAGCG GGAATTTCGG GAGCTCGCCG CTTCTTCTGG AAGGGCGCAT CACAGACTAC
CCCCTGACGG TCCCCTGCCA GTACCTCTTC AACGCCAAGG TCCAGCCCAA AAAGGCCGAG
GCCGTATGGC TTTTGGGAAA AGGGCTCACC TCCTTCTCCG ACGGCTCCAC CTTGAATCTC
AAAGGAGAAG GTACCACCGC CCTCTATAAG CTCTCCGGAG ACGCGAACCT CACCGCTACC
ACCTACGCCT TCCGCGACAT AGTGGCCAAG CCCGTGTCGC GCCCGAACGC CCTCTCCTTC
GCCATGAACT TCGACAAGGA GCAGTTCCGG ATCACCGCGC TCAACTACCA GCTCGCTCCG
GCAGCCCTCT CGGCGACCGC AGTCAGCCGC TACGACGGTC CGGTCAGCTT CGACATCAGG
AGCAACCGCT TCCAGTCCGG GGAGGTCGGC TACATGGTGC CGATGGCGCG CGACTACCGC
CCGGCGGGCC TGGTGCAGCT GCAGTTGCAC GCGGCCGGTC CGGACATGGA GCGGCTTTTC
TGGAGCGGCA ACGCGGCCCT CTCCAACGTC TCGGTGAAGG CGGGCGACAA GGTGCGGCCG
GTCTCCGGGG TTAACGGGAA CGTCCGGATC AACGGCGAGA GTTTCGAGAG TACGCAACTC
TCGCTCAGGG TCGGCGGGTC GAGCATCAGC GGCAAAGGGA CCGTGACGGG GCTGGACCAT
CCGAGCTTCC TCATCTCCTT CAGCTCGCCC TCTCTGTATC TGTCCGACCT GGGGCTTGTC
CCCGCGAAGA ACCCGGTGCG GGTGGAGCGC GTGCAGGGGA CCCTAGCCTA CCAAAACGAC
AACCTCCAGA TCGCCGCCCT ATCCGGGACC CTCGGCAAGA GCCCTCTTTC GCTGAAAGGG
AGCGTGAAGG AACTCAAGAA CCCGGTAGCG GACCTGTCGG TTAGCTCGCC GCACCTCGAA
GTCGAGGACC TGTTCCCGCT CTTTGGCGGC TCGGGCGAGG GTGAGAGCCG GGTCACGCTC
AAGGCGCACT TAACCGCCAG CGAAGGGAAA TTCAGCGACC TCCCCTTCCA GCACCTGCGC
TGCAGCGTGC TTCTGGAAAA CAAGGTGCTG CACCTGCAGC CCTTCGACTT CGCCGCTTTC
GAGGGGGAGG TCTCCGGGAG GCTCAAGAGC GACTTCAACC AACTGCCGGT GCGCCACACG
CTTAGCTACA ACGTGCAGAA GGTTTCTGCG GACCCGCTGA TGCGGAGCAT GGGGGTGAAA
AAACAGGAGA TTACCGGGGC AATGACGCTC TCGGGTGAGC TCGCCGGGAG GGGCGACACC
TCCGCCGAAT GGAAGAGGAG CGCGCAGGGG AACCTGAAGC TCAAGGTGGA GCGCGGCAGC
ATCAGGAAGT TTTCGACCCT CTCCAAGGTC TTCTCCATCC TGAACGTCTC GCAGCTCTTC
AAGTTCCATT TGCCCGACAT GGTGTCGGGG GGAATGCCCT TCAACAAGAT AACCGGCGAC
TTCACCTTTA AAGATGGCAT CGCCTCTACG GATAACCTCT TCCTGGACAG CAACGCCATG
AACATCTCGG CGGTGGGAAG ACTGAACCTG GTCAAAAACG AACTGGACCT GAACATCGGG
GTGCAACCGC TGCAGACCGT GGACAAGGTG GTGAGCAAGA TACCGATCGT GGGGTGGGTG
CTGACCGGCA AGGACAAGTC GCTGATCACC ACCTACTTCG AGGCCAAAGG GCGCATCGAC
GACCCGCAGG TTACCGCGGT TCCGGTAAAG TCGCTCGCCA AGGGGGTATT CAACATTTTC
AAGAGGGTTT TCGAACTCCC GGCCCGGCTC TTCACGGACA CCGGAGAGGT GGTGATAGGA
AGATAG
|
|---|
| Protein sequence | MLLKKIRSWL LPALATILTV IVLAAALLPR LLDLDTYKQE ILAQVKSSLK RDLQYQTGEF
SLRLTPAFTF TGVTVKEKDG SSDFITADRL TVRIAILPLL RKKLVVSRLQ LERPAMRIVR
DRQGTFNIAD LLTPSAGGEA PGIRGLELKK GHIRFTDFAF SEKPVVTELS NADLFLSRLV
RGKSCDFKLA AALGSPKGPV PVSLSGSAKI PEAGTPFSGM EVNGKVATGP LDAGHFWPYY
SKWVPFKSLA GELALDASFK GRLNAFKSKA EFRITRLNLD YPQVFHARLT PRLLKGSCAL
TLTANQLDIE HVKVDLDGFK VNGGVRLSDI HSGDLRITAN ASSNSFNLRD FHQYIPYGII
VDDTSHFIEQ KIKGGVYRLE QGHLDGRVSQ ILHMERGQNY NVLAIKAHVQ EGVVDYGSGI
PVFSGIRGEL QLAGKDFLLK GMSGNFGSSP LLLEGRITDY PLTVPCQYLF NAKVQPKKAE
AVWLLGKGLT SFSDGSTLNL KGEGTTALYK LSGDANLTAT TYAFRDIVAK PVSRPNALSF
AMNFDKEQFR ITALNYQLAP AALSATAVSR YDGPVSFDIR SNRFQSGEVG YMVPMARDYR
PAGLVQLQLH AAGPDMERLF WSGNAALSNV SVKAGDKVRP VSGVNGNVRI NGESFESTQL
SLRVGGSSIS GKGTVTGLDH PSFLISFSSP SLYLSDLGLV PAKNPVRVER VQGTLAYQND
NLQIAALSGT LGKSPLSLKG SVKELKNPVA DLSVSSPHLE VEDLFPLFGG SGEGESRVTL
KAHLTASEGK FSDLPFQHLR CSVLLENKVL HLQPFDFAAF EGEVSGRLKS DFNQLPVRHT
LSYNVQKVSA DPLMRSMGVK KQEITGAMTL SGELAGRGDT SAEWKRSAQG NLKLKVERGS
IRKFSTLSKV FSILNVSQLF KFHLPDMVSG GMPFNKITGD FTFKDGIAST DNLFLDSNAM
NISAVGRLNL VKNELDLNIG VQPLQTVDKV VSKIPIVGWV LTGKDKSLIT TYFEAKGRID
DPQVTAVPVK SLAKGVFNIF KRVFELPARL FTDTGEVVIG R
|
|---|
| |