| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0887 |
|---|
| Symbol | |
|---|
| ID | 6783724 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | + |
|---|
| Start bp | 1039239 |
|---|
| End bp | 1040201 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 642766859 |
|---|
| Product | metal dependent phosphohydrolase |
|---|
| Protein accession | YP_002137704 |
|---|
| Protein GI | 197117277 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2206] HD-GYP domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.665432 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGGGAGA TGTACGTACC CGTCAGCATA GAAAGCATCC AGGCCGATCT TTTCCCGGAT
GTGGCCCTTT ACATCAGAAG TGGTGAAAAA TACATCCTTT ACAAGAGCCA TGGCCGCAAT
TTCACCGCCA GCGACCAGGA ACGGCTCATG GAAAACAAGG TGGAGTTCCT CTTCGTAAGT
CCGGCCGACC TGGAGGTGAT CACGACCTTC ATGGAGAACA ACGCCGAGCG CGTGTTGAAG
GACAATACGC TGCAGGCGAA GACCAAGGGA AAGATCATCT ACCAGACCTC CATCAACTTC
GTGGGGGACA TCTTCGAACA CCCAGAGAAG GTCTCGGATT TTTCCCGTAG CAAGCGGCTG
GTGGAAAACC TGCTGCAGTA CCTGGCCAGC GACCGCGATT CCTTCAATTC CCTGGAAAGC
GTGATGGCCC ACAACTACTA CACCTTCGTG CACAGCCTGC AGGTGACCGC GCTGTCGGTG
CTGCTGCATG CGGAGGCCTA CCTTCTGTCC CACGACGAAA TGCTCGACGT CGGTATCGGG
ACTCTCCTGC ACGATTTCGG CAAGGTATTC GTTGCGCCAG CGATCCTGAA CAACGAAGGG
AAGCTCTCCA AGGCCGAGAT CGAGGAATAC CGCAAGCATC CGGAAGAGGG GTACCAGTAC
CTCAAGAAAA ACACCAGGCT TTCCGAGATC TCCCTCGGAG TCGTGCGCTG TCATCACGAG
CGCAACAACG GCAACGGGTA TCCCCAGGGG CTGAAAGGGC CGGCCATTTC CCGCAGCGCG
CAGGTCGCCG CCATCTGCGA CGTCTACTGC ACCTTAACCA TCGACCGTGC CTGCCGTAAG
GCCCTCAGTT CCGCCATTGC CGTCTCCATC ATGAAGCAGG AGATGAAGGG CTCGTTCAAC
GAGCGGCTGC TCGATGTACT GGAAGGGATC GTCTGCACCG AAAACCCGGC GCAGTTCTTG
TGA
|
|---|
| Protein sequence | MGEMYVPVSI ESIQADLFPD VALYIRSGEK YILYKSHGRN FTASDQERLM ENKVEFLFVS
PADLEVITTF MENNAERVLK DNTLQAKTKG KIIYQTSINF VGDIFEHPEK VSDFSRSKRL
VENLLQYLAS DRDSFNSLES VMAHNYYTFV HSLQVTALSV LLHAEAYLLS HDEMLDVGIG
TLLHDFGKVF VAPAILNNEG KLSKAEIEEY RKHPEEGYQY LKKNTRLSEI SLGVVRCHHE
RNNGNGYPQG LKGPAISRSA QVAAICDVYC TLTIDRACRK ALSSAIAVSI MKQEMKGSFN
ERLLDVLEGI VCTENPAQFL
|
|---|
| |