| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0869 |
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| Symbol | |
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| ID | 6783707 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 1024256 |
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| End bp | 1025803 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642766843 |
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| Product | RNA polymerase, sigma 54 subunit, RpoN |
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| Protein accession | YP_002137688 |
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| Protein GI | 197117261 |
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| COG category | [K] Transcription |
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| COG ID | [COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog |
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| TIGRFAM ID | [TIGR02395] RNA polymerase sigma-54 factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAATAG AGATGCGCCA GCAGATGAAA ATGAGTCAGC AACTGGTGAT GACGCCCCAG
TTGCAGCAGG CCATCAAGCT CCTCCAGCTT TCCCGGCTGG AGTTGCAGGA CGTAGTACGT
CAGGAGCTGG AGGAGAACCC CATACTCGAC GAGGTGATCG AGCAGGAGGA GATCCGGGAA
CCCGAGCAGA TCGAGTTGCG CGAGAAGGAA GCCGAGCCGG AGGCCGCAGC GAGCGATTTC
CAGGAAGTGC GGGCCGGCGA GGAGACGCGC GAGGCGGACT GGGATTCCTA CATAGACGGC
TACAACTACA GCTCCGGCGA GCAGTACTAC GACGACGAGG ACCGTCCCTC CTTCGAGAAC
CTCCTCACCA AGAAATCCAC CCTGTTCGAC CACCTGATGT GGCAGCTGAG CCTCACCCGC
CTCACCGAGC GCGAGATTGT GGTAGGAGCC GAAATCATCG GCAACATCGA CGAGGAGGGC
TACCTCCGCG CCTCCCTCGA GGACGTAGCT TCCGCCTGCG TGCAGGTTGC CCCGTTTCAG
GAAGAGATGC TCGAGTGGTC GGGGCTCGGC TCTGACGCCT GCGAGGAAGA GATCGCCGAT
GCTGCGGGCG GTTTCTCCAC TGCCGTGCTG GTTCCGCTGG TCGATTCGGT GTTGAAGCGG
ATCCACGAAT TCGACCCGGT CGGCGTCGGG GCTCGCGACC TGCGCGAGTG CCTCCTGATC
CAGGTCGGCA GCCTCGGCAT GGGGGGGAGC CTCGTGGAGT CGCTGTTGCG CGACCACCTT
AAGGACCTGG AGAGCCACAA GTACAAGCAG GCCGCCAAGG TGCTGGGGGT GGAGGTGAAC
GACATCCTCG CCGCCACGAG GATCATCGCG GAACTCGATC CCAAGCCGGG GCGGGTCTTT
GGCAGCGACG ACGTGCAGTA CATCTCGGCC GACATCTTCG TGCACAAGGT GGGTGAAGAG
TACGTGGTGA TGCTGAACGA CGAGGGGATG CCCAACTTGA GGATCAACCC CATCTACGCC
CCCGACGCCA AGAGCAGCCG CCCGGTGGAC AAGGTGGCCG AGGATTACAT CGGCGAGAAG
ATGCGCTCCG CCCTGTGGCT CATCAAGAGC ATCCAGCAGC GCCAGCGCAC CATCTTCAAG
GTGGCCAAGA GCATCGTGAA GTTCCAGCGC GAATTTCTGG ACCGCGGCAT CGAGCACCTG
CGCCCGCTGG TCCTGAGGGA CATCGCCGAG GACATCGGCA TGCACGAGTC CACCATCAGC
CGTGTCACCA CCAACAAGTA CATGCAGACC CCGCAGGGGC TCTTCGAGCT GAAGTACTTC
TTCAACTCCG GCATCTCGAC CGGGGAGGGG GACTTCATCG CCTCCGAGAG CGTGAAGAGC
AAGATCAAGG AACTGGTGGA CAACGAGGAC TCCAAGCGCC CCTACAGCGA CCAGCGCCTG
GCGGAACTCC TCTCGGACCA CAACATCGTC ATAGCCCGCC GCACCGTTAC CAAGTATCGC
GAGATGCTTC GGATCGGCTC GTCTTCGGAG CGCAAGAAGC ATTTCTAA
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| Protein sequence | MAIEMRQQMK MSQQLVMTPQ LQQAIKLLQL SRLELQDVVR QELEENPILD EVIEQEEIRE
PEQIELREKE AEPEAAASDF QEVRAGEETR EADWDSYIDG YNYSSGEQYY DDEDRPSFEN
LLTKKSTLFD HLMWQLSLTR LTEREIVVGA EIIGNIDEEG YLRASLEDVA SACVQVAPFQ
EEMLEWSGLG SDACEEEIAD AAGGFSTAVL VPLVDSVLKR IHEFDPVGVG ARDLRECLLI
QVGSLGMGGS LVESLLRDHL KDLESHKYKQ AAKVLGVEVN DILAATRIIA ELDPKPGRVF
GSDDVQYISA DIFVHKVGEE YVVMLNDEGM PNLRINPIYA PDAKSSRPVD KVAEDYIGEK
MRSALWLIKS IQQRQRTIFK VAKSIVKFQR EFLDRGIEHL RPLVLRDIAE DIGMHESTIS
RVTTNKYMQT PQGLFELKYF FNSGISTGEG DFIASESVKS KIKELVDNED SKRPYSDQRL
AELLSDHNIV IARRTVTKYR EMLRIGSSSE RKKHF
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