| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0572 |
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| Symbol | |
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| ID | 6783405 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 694786 |
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| End bp | 695856 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642766545 |
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| Product | branched-chain amino acid aminotransferase |
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| Protein accession | YP_002137396 |
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| Protein GI | 197116969 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
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| TIGRFAM ID | [TIGR01123] branched-chain amino acid aminotransferase, group II |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000149445 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAATCA GGATAGTGCC CCTCAGCGAG GGGGAGAAAA AGGCGAAATT CAAAGACGAA
TCACAGCTTG GCTTTGGCAA GATTTTCACC GACCGCATGC TTTTGATCGA GTGGAAGGTC
GGCCAGGGGT GGGTAGATGC CAGGATCAAG AAGTACGAGC CGTTCCAGCT CGACCCGGCG
GCGCTCGTGT TGCATTATGC CCAGGAAATC TTCGAAGGGC TCAAGGCCTA CAGGTGGAAG
GACGGCACCA TTGCTCTCTT CCGTCCCGAG ATGAACGCCC GCCGCTTCAA CCACTCAGCG
GACCGGCTCT GCATGCCCGA GATCCCCGAG GAACTCTTTG TAAGCGGCAT CGAGCAGTTG
GTGGCCGCCG AGCGCGAATG GGTCCCCGGC GCCGAAGGGA CCTCCCTCTA CATCCGCCCC
GCCATGATCG CCGTGGAGCC GCATGTCGGC ATCAAGCCTT CGGACCACTA CTACTTCTAC
GTGATTCTCT CCCCGGTCGG CGCCTACTAC GCCAACGGCT TCAATCCCGT GAAGATCATG
GTGGAGGACC ATTACGTGAG GGCAACCCCG GGCGGCACCG GCGAGGCCAA GACCGGCGGC
AACTACGCCA GCTCGCTCAA GGCGGGACTC GAGGCCAAGA AGAAAGGGTT CGACCAGGTG
CTCTGGCTGG ACGGCGTCCA CAAGCGTTAC ATCGAGGAAG TCGGCTCGAT GAACATGTTC
TTTGCCTACG GCGACACCAT CGTCACCGCG CCGCTTGAAG GAAGCATACT CAACGGCATC
ACCCGTGACT CGGTGCTGAC CCTGGCCAAG TCGTTGAACC TGAAGGTCGA GGAGCGGCGC
ATAGACGTCA ACGACCTGAT GGCGGATCTG AAAAGCGGGA AGATCACCGA GGCATTCGGC
AGCGGCACCG CCGCGGTGGT AACCCCGGTC GGTACCCTGA GCTACGCCGG CGATACGGTC
CAGGTGGGCA ACGGCGGCGT AGGGAAATAC ACCCAGGTGC TCTACGACAC GCTGACCGGG
ATCCAGACCG GCAAGATCGA AGACCGATTC GGCTGGATCA GGAAGATCTA G
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| Protein sequence | MEIRIVPLSE GEKKAKFKDE SQLGFGKIFT DRMLLIEWKV GQGWVDARIK KYEPFQLDPA
ALVLHYAQEI FEGLKAYRWK DGTIALFRPE MNARRFNHSA DRLCMPEIPE ELFVSGIEQL
VAAEREWVPG AEGTSLYIRP AMIAVEPHVG IKPSDHYYFY VILSPVGAYY ANGFNPVKIM
VEDHYVRATP GGTGEAKTGG NYASSLKAGL EAKKKGFDQV LWLDGVHKRY IEEVGSMNMF
FAYGDTIVTA PLEGSILNGI TRDSVLTLAK SLNLKVEERR IDVNDLMADL KSGKITEAFG
SGTAAVVTPV GTLSYAGDTV QVGNGGVGKY TQVLYDTLTG IQTGKIEDRF GWIRKI
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