Gene Gbem_0536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_0536 
Symbol 
ID6783365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp647774 
End bp649369 
Gene Length1596 bp 
Protein Length531 aa 
Translation table11 
GC content63% 
IMG OID642766506 
ProductPAS/PAC sensor hybrid histidine kinase 
Protein accessionYP_002137361 
Protein GI197116934 
COG category[T] Signal transduction mechanisms 
COG ID[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGACCG ACGAAAACAC CATCGCCATC CCGCAGCTCA TTTACGAGGC GGTCAGCCGA 
GGGAAGCGCG AATGGGAGCA GACCTTCGAC TCCATCGCCG ACCTGATCTT CATCACCGAT
ACCAACCACA CCATTTCGCG GGCCAACCGC GCCATGGCGA AGCATTGCGG CCTGCGTCCG
GAGGACCTCC CGGGACGCAA ATGCTACGAC CTCTTCCACG ACCTGGCCTC TCCCCCCCCT
TATTGCCCGC TGAAAAGCCT GAAAGAGGGA GGTGCGCCGC GGGCGGAGGA AGTCGAGGTC
GCCAAATTCT GCGGCTTCTT CGACATCTCG GTCTCCCCTT TGTACAACGA TGAAGGAACC
CTCGCCGCCT GCGTCCACGT GGCCCGCGAC GTCACCGAGC GCAAGAAGGC CGAGGAGTAC
CGGCTGGAGT TGGAGCAGCA ACTGCTGCAA TCGCAAAAGC TCGAAAGCCT TGGTGTTCTC
ACCGGCGGCA TCGCCCATGA CTTCAACAAT ATCCTGATGA TAATCCTCGG GCACTGCCTG
CTCGCCAAGG AGAACCAGGC CAGCGCCCCG GTCGTCGGCC ACCTGGATCA GATCGAGTCC
GCCGGAAACC GTGCCGCCGA CCTTTGCCGC CAGATGCTGG CCTACGCCGG CAAGGCGCCG
CTGATCCAAA CGCAGATCGA CCTGCCGGCG CTGGTACGCG ACATGGTGCA GATGCTGCAG
CCCGCGTTCA ACAAGAAAGT GACCATCGAA TGCGATCTCG GCGGGGACCT CCCCAAGCTG
ACCTGCGACG AGGCAAAGAT CCAGCAGATC GTGATGAACT TGGTGGTGAA CGCGGCCGAA
TCGCTGGGTG AACAGGGGGG CAAGGTCAAG GTGACCCTCT CGCACAAGAC GGTGCTGCAG
GCACAGCAGG AAGTCGATTG CTTCGGCAAC GTCATCCCCC CGGGAACCTA TCAGTGCCTG
GAGGTTGCCG ACACCGGATG CGGCATGGAC CAGGAGACCC AGAAGCGGAT CTTCGAACCA
TTTTTCACCA CCAAGTTCAC CGGGCGGGGG CTGGGGCTTT CCGCCATCAG CGGCATCATC
AAGTCCCATA ACGGCGCGCT GCAGCTCTGC AGCGCCCCCG GCGCGGGGAC CACTTTCAGC
GTCTATTTTC CCCTCCCCCC ATGCTGCCCC GCCGGCGACC AAGTCGCTGC GCCCCTCCCC
TTGCCGCTCA ACGCTGCCGC CCGGCTCGAA GGGACTATCC TGCTGGTAGA CGACGAGGAG
GAACTTCGTG CCGTCGGCTG TGAACTCCTC ACCAGCATGG GGTTCAAGGT GATTGCCGTC
AATAACGGCA GCGAGGCGCT CGCGATCTGG CAGGAGCGGA AAAGCGAGAT AGACCTCGTG
CTGATGGACC TGACCATGCC GGAACTGGAC GGCGTCGAGA CCTACCGCGC CCTGCGCGAA
GATACCCCCA CGCTCCCGGT TCTTTTTTGC AGCGGATACG GGGACCAGGA CATCCGGCCC
TGCATAGGCG AAGACGCCCG CGCCGGCTTC ATCGCCAAGC CTTACCAACT TGCCCAACTA
CAAGCGGCAT TGGCTGCCCT CTGGAAAACC GCATAG
 
Protein sequence
MVTDENTIAI PQLIYEAVSR GKREWEQTFD SIADLIFITD TNHTISRANR AMAKHCGLRP 
EDLPGRKCYD LFHDLASPPP YCPLKSLKEG GAPRAEEVEV AKFCGFFDIS VSPLYNDEGT
LAACVHVARD VTERKKAEEY RLELEQQLLQ SQKLESLGVL TGGIAHDFNN ILMIILGHCL
LAKENQASAP VVGHLDQIES AGNRAADLCR QMLAYAGKAP LIQTQIDLPA LVRDMVQMLQ
PAFNKKVTIE CDLGGDLPKL TCDEAKIQQI VMNLVVNAAE SLGEQGGKVK VTLSHKTVLQ
AQQEVDCFGN VIPPGTYQCL EVADTGCGMD QETQKRIFEP FFTTKFTGRG LGLSAISGII
KSHNGALQLC SAPGAGTTFS VYFPLPPCCP AGDQVAAPLP LPLNAAARLE GTILLVDDEE
ELRAVGCELL TSMGFKVIAV NNGSEALAIW QERKSEIDLV LMDLTMPELD GVETYRALRE
DTPTLPVLFC SGYGDQDIRP CIGEDARAGF IAKPYQLAQL QAALAALWKT A