| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0536 |
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| Symbol | |
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| ID | 6783365 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 647774 |
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| End bp | 649369 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642766506 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_002137361 |
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| Protein GI | 197116934 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGACCG ACGAAAACAC CATCGCCATC CCGCAGCTCA TTTACGAGGC GGTCAGCCGA
GGGAAGCGCG AATGGGAGCA GACCTTCGAC TCCATCGCCG ACCTGATCTT CATCACCGAT
ACCAACCACA CCATTTCGCG GGCCAACCGC GCCATGGCGA AGCATTGCGG CCTGCGTCCG
GAGGACCTCC CGGGACGCAA ATGCTACGAC CTCTTCCACG ACCTGGCCTC TCCCCCCCCT
TATTGCCCGC TGAAAAGCCT GAAAGAGGGA GGTGCGCCGC GGGCGGAGGA AGTCGAGGTC
GCCAAATTCT GCGGCTTCTT CGACATCTCG GTCTCCCCTT TGTACAACGA TGAAGGAACC
CTCGCCGCCT GCGTCCACGT GGCCCGCGAC GTCACCGAGC GCAAGAAGGC CGAGGAGTAC
CGGCTGGAGT TGGAGCAGCA ACTGCTGCAA TCGCAAAAGC TCGAAAGCCT TGGTGTTCTC
ACCGGCGGCA TCGCCCATGA CTTCAACAAT ATCCTGATGA TAATCCTCGG GCACTGCCTG
CTCGCCAAGG AGAACCAGGC CAGCGCCCCG GTCGTCGGCC ACCTGGATCA GATCGAGTCC
GCCGGAAACC GTGCCGCCGA CCTTTGCCGC CAGATGCTGG CCTACGCCGG CAAGGCGCCG
CTGATCCAAA CGCAGATCGA CCTGCCGGCG CTGGTACGCG ACATGGTGCA GATGCTGCAG
CCCGCGTTCA ACAAGAAAGT GACCATCGAA TGCGATCTCG GCGGGGACCT CCCCAAGCTG
ACCTGCGACG AGGCAAAGAT CCAGCAGATC GTGATGAACT TGGTGGTGAA CGCGGCCGAA
TCGCTGGGTG AACAGGGGGG CAAGGTCAAG GTGACCCTCT CGCACAAGAC GGTGCTGCAG
GCACAGCAGG AAGTCGATTG CTTCGGCAAC GTCATCCCCC CGGGAACCTA TCAGTGCCTG
GAGGTTGCCG ACACCGGATG CGGCATGGAC CAGGAGACCC AGAAGCGGAT CTTCGAACCA
TTTTTCACCA CCAAGTTCAC CGGGCGGGGG CTGGGGCTTT CCGCCATCAG CGGCATCATC
AAGTCCCATA ACGGCGCGCT GCAGCTCTGC AGCGCCCCCG GCGCGGGGAC CACTTTCAGC
GTCTATTTTC CCCTCCCCCC ATGCTGCCCC GCCGGCGACC AAGTCGCTGC GCCCCTCCCC
TTGCCGCTCA ACGCTGCCGC CCGGCTCGAA GGGACTATCC TGCTGGTAGA CGACGAGGAG
GAACTTCGTG CCGTCGGCTG TGAACTCCTC ACCAGCATGG GGTTCAAGGT GATTGCCGTC
AATAACGGCA GCGAGGCGCT CGCGATCTGG CAGGAGCGGA AAAGCGAGAT AGACCTCGTG
CTGATGGACC TGACCATGCC GGAACTGGAC GGCGTCGAGA CCTACCGCGC CCTGCGCGAA
GATACCCCCA CGCTCCCGGT TCTTTTTTGC AGCGGATACG GGGACCAGGA CATCCGGCCC
TGCATAGGCG AAGACGCCCG CGCCGGCTTC ATCGCCAAGC CTTACCAACT TGCCCAACTA
CAAGCGGCAT TGGCTGCCCT CTGGAAAACC GCATAG
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| Protein sequence | MVTDENTIAI PQLIYEAVSR GKREWEQTFD SIADLIFITD TNHTISRANR AMAKHCGLRP
EDLPGRKCYD LFHDLASPPP YCPLKSLKEG GAPRAEEVEV AKFCGFFDIS VSPLYNDEGT
LAACVHVARD VTERKKAEEY RLELEQQLLQ SQKLESLGVL TGGIAHDFNN ILMIILGHCL
LAKENQASAP VVGHLDQIES AGNRAADLCR QMLAYAGKAP LIQTQIDLPA LVRDMVQMLQ
PAFNKKVTIE CDLGGDLPKL TCDEAKIQQI VMNLVVNAAE SLGEQGGKVK VTLSHKTVLQ
AQQEVDCFGN VIPPGTYQCL EVADTGCGMD QETQKRIFEP FFTTKFTGRG LGLSAISGII
KSHNGALQLC SAPGAGTTFS VYFPLPPCCP AGDQVAAPLP LPLNAAARLE GTILLVDDEE
ELRAVGCELL TSMGFKVIAV NNGSEALAIW QERKSEIDLV LMDLTMPELD GVETYRALRE
DTPTLPVLFC SGYGDQDIRP CIGEDARAGF IAKPYQLAQL QAALAALWKT A
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