Gene Gbem_0508 details

Gene Information

• Locus tag: Gbem_0508
• ID: 6783337
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter bemidjiensis Bem
• Kingdom: Bacteria
• Replicon accession: NC_011146
• Strand: +
• Start bp: 616644
• End bp: 617297
• Gene Length: 654 bp
• Protein Length: 217 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 642766478
• Product: isochorismatase hydrolase
• Protein accession: YP_002137333
• Protein GI: 197116906
• COG category: [Q] Secondary metabolites biosynthesis, transport and catabolism
• COG ID: [COG1335] Amidases related to nicotinamidase

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAAGCGAT CTAAAAAAAT AATGTTCTGC TCTGCTGGTT CTGTTCTTCT TCTGGTGCTT 
GTGCTATTCG CTGCGATCTA CTGGAGTATG CGCCCCACAA CGGGAACTCC AATCAACAAA 
TATGCCACTC CACGCGCTGC GCTTCTTATC GTTGACATCC AAGAAGACTA CACTGGCCCG 
CAAGCAAAGA AACGCTACAG GGACGGTGAT CGCATCGTCA CTGTCTCTAA TGCATTACTG 
GCACAGGCCC AAGCAAACGG AGCCGTTGTC GTGTTTGTAA AGAACGTGAT CGATAACCCG 
ATCATGTCTG CTCTCATGGG CGGAATCAAC GCCCCAGATT CACCCGGTGC GGAAATGGAC 
CGCCGCCTCA TCGAAATTCC CGCGGCGGTT ACTTTCCAGA AGAGCCGGCC GGATGCGTTT 
TCCACTCCAG AGCTTGATGC CTATCTTAGA GAAAAGCAGG TAGACCAAAT ATTTATCACC 
GGCCTGGACG GCGCCTACTG TGTGAGCGCC ACTGCTCGTG GCGCTCTCAA TCGCGGCTAC 
AAAGTGACGC TGTTTCAGGA CGGCGTAGCG ACCGAAAGCA GCAAAAACAT AGAGGAGTTG 
GCCAAGAGTT GGCGTCAAGC CGGAGCTCAA GTTAAGACGG GCTCCGAGAT TTAA 

 

Protein sequence

MKRSKKIMFC SAGSVLLLVL VLFAAIYWSM RPTTGTPINK YATPRAALLI VDIQEDYTGP 
QAKKRYRDGD RIVTVSNALL AQAQANGAVV VFVKNVIDNP IMSALMGGIN APDSPGAEMD 
RRLIEIPAAV TFQKSRPDAF STPELDAYLR EKQVDQIFIT GLDGAYCVSA TARGALNRGY 
KVTLFQDGVA TESSKNIEEL AKSWRQAGAQ VKTGSEI