Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_0469 |
Symbol | |
ID | 6783296 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | - |
Start bp | 565464 |
End bp | 567788 |
Gene Length | 2325 bp |
Protein Length | 774 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642766438 |
Product | GAF sensor signal transduction histidine kinase |
Protein accession | YP_002137294 |
Protein GI | 197116867 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGCAGA AGCAGCTCTA CAACAGCAGG ATACTGCTCA CCTACCTCAA TTTGCTCAAC AGCAGGTACG GCGAGGTCGA CCACGCCGAC ATCCTCGACT ACGCCGGAAT CAGCCCATAT CAAGTGACCG ACGCCGCCCA CTGGTTCACC CAGTCCCAGG TGGACCGGTT CAACGAACGG TTGGTGCAGC TGACCGGGAA TCCCGGCATC GCGCGCGAGG GGGGGAGGTA CGCCGCCTCC CGCGACTCGC TGGGCTTCAT AGGAAAGTAC GTCCTCGGGC TGATCGGTCC CGGCAACGCC TTTTTCACCA TCAACCAATC CAGCTCCAAC TTCACCAGGT CTTCGCGCTT CGCATGCAGG AAGCTCGCAA CCAACAAGGT GGAGATCACG GTGACCCCGC TTCCCGGGGT TAAGGAGCGC CCCTTCCAGT GCGAGAACCG CATCGGCTTC TTCGAGGCCA TACTGGCAAG CTTCAACTGC GAATCCCCCC TCATCGATCA CTCCGAGTGC ACCTTCAAGG GTGGCGCCTG CTGCCGCTAC GTCATCTCGT GGCGTAACAG CCTGCCGCGG CGGCTGCGCA CGACCCGGAA CCTATTCACC GCGGGGATGG TAGCCCTAGC CCTGGTTTTC CATCACCCGT TCCCCTGGAC CGCCCTGTCG CTGGGCCCGC TGTTTCTGGC CTTCTTCTGC GCCTTGAGCC ACCTAGCCTC CCACCTGGAA AAACGGGAAC CGCATGCGGC GCTGGTCAAC CTTAAAGAGT CGACGGACGA ACTCCTGGAA CAGACTGCCA CCAATTACCA GAACGCCCTG ATGGTCAACG AGGTCGGCCA GGCAGTCAGC AAGCAGACGA ACAAGGACCA ACTGCTCGAC AACATCGTCG CGGCGCTGGA AATGAGGCTC GGCTACGACC GCGGGATGAT ACTTCTGGCC GACGCCAACC GGGCTACCCT CAAGTTCCGC GTCGGTTTCG GCTACGACGA GTCCCAGCTG AAGACCTTGC AGGACGCCTG CTTCAGCCTG GACAACCCCG ATTCGCAGGG GGTCTTCGCC ACCTGCTTCA CCCAGCATAA ACCTTACCTG ATCAACGACT TCTCCCGGGT GGCCTCGCTG CACTCGCCGC AGAGCGTGCT CTTCGCGCAG CATATGGGGG CACAGTCGTT CATCTGCTGC CCCATAGTCT GCGAGGGGGA ATCGCTTGGG GTTCTCGCCA TGGACAACGT GCGGACCAAG AGGCCCCTGG TCGGCAGCGA CATGAGCCTG CTGATGGGGG TGGCGCCGGT GATCGGGATA AGCATCCGGA ACGCGATCTA CATCGATAAC GAGAGGAGCA TGACTGAGCA GTTGCGCCAG TCGCAGAAAA GGGAGGCCAT AGGCGAGTTG GCCAGCGGCG TCGCGCACGA CTTCAACAAC CTGCTCACCG CGATCATCGG CTTCGCCAGT CTGGCCCAGG CGAACCTCGA TCCCGGCACC ATACCTTTCC AGTACCTCGA CGAGGTGCTG AACGCCTCCG AGCGCGCCAC CTACCTTACC CGGGGGCTCC TCGCCTTCGG CAGGAACCAG GCCGCCAATC CCCAACCGGT GGACCTGAAC CGGATCGTAG GGCAGATGGA GAAGCTGCTG GGGCGTCTCA TCTCCAGACA GATCGAGCTC AAGGTTTCGC TTTGCCATGA GTCGCCCACG GTCCTCGCCG ACGCCGGGCA GTTGGACCAG GTAGTGATGA ACCTGGCCAC CAACGCACGC GACGCCATGA ACAACGCAGG GGTTCTCACC ATAGAGACCG CGGTAGTGAC ATTCCCCCCC GACTCCGACA GGGCGCACGG CGTAAAAAGG GGGGGGCGCT ACGCGAGGCT TTCGGTCAGA GACACCGGGA GGGGGATGGA TGAGGCGACG CGGGGCAGGC TCTTCGAGCC TTTCTTCACC ACCAAGGAGA CCGGGCAGGG GACGGGGCTG GGGCTTGCCA TAGTCCAGGG GATCGTGCAG CAAAACGGGG GGGTTCATAG AGGTGGAAAG CACCCCTGGG GAAGGGGCCT GCTTCCTTAT CCATCTCCCC CTGCTGCAGG AGATCTCCGC GCCCGCGCAG GCGCCCCTGG CCGCGCCTCT TCCCTGCGCC GGCTGCGAAA CCATCCTCGT GGCCGAAGAT GCCCTGGAGG TCCGGAGGGT GACGACCGAA CTGCTGCAGC AGCACGGCTA CCGCGTCATC GAGGCGGCCG ACGGCCGCGA GGCGCTGGAA AAATTCCTGG CCCACCAGGA CCAGATCAAG CTGGTGATCA TGGACCTGGT GATGCCGAGG ATGAACGGCC GCGACGCCTT CGACGCGATC GCTAA
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Protein sequence | MTQKQLYNSR ILLTYLNLLN SRYGEVDHAD ILDYAGISPY QVTDAAHWFT QSQVDRFNER LVQLTGNPGI AREGGRYAAS RDSLGFIGKY VLGLIGPGNA FFTINQSSSN FTRSSRFACR KLATNKVEIT VTPLPGVKER PFQCENRIGF FEAILASFNC ESPLIDHSEC TFKGGACCRY VISWRNSLPR RLRTTRNLFT AGMVALALVF HHPFPWTALS LGPLFLAFFC ALSHLASHLE KREPHAALVN LKESTDELLE QTATNYQNAL MVNEVGQAVS KQTNKDQLLD NIVAALEMRL GYDRGMILLA DANRATLKFR VGFGYDESQL KTLQDACFSL DNPDSQGVFA TCFTQHKPYL INDFSRVASL HSPQSVLFAQ HMGAQSFICC PIVCEGESLG VLAMDNVRTK RPLVGSDMSL LMGVAPVIGI SIRNAIYIDN ERSMTEQLRQ SQKREAIGEL ASGVAHDFNN LLTAIIGFAS LAQANLDPGT IPFQYLDEVL NASERATYLT RGLLAFGRNQ AANPQPVDLN RIVGQMEKLL GRLISRQIEL KVSLCHESPT VLADAGQLDQ VVMNLATNAR DAMNNAGVLT IETAVVTFPP DSDRAHGVKR GGRYARLSVR DTGRGMDEAT RGRLFEPFFT TKETGQGTGL GLAIVQGIVQ QNGGVHRGGK HPWGRGLLPY PSPPAAGDLR ARAGAPGRAS SLRRLRNHPR GRRCPGGPEG DDRTAAAARL PRHRGGRRPR GAGKIPGPPG PDQAGDHGPG DAEDERPRRL RRDR
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